Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PGK1P00558 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PGK1P00558 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PGK1P00558 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.27■■□□□ 1.16
PGK1P00558 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PGK1P00558 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PGK1P00558 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PGK1P00558 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PGK1P00558 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PGK1P00558 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PGK1P00558 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC22.26■■□□□ 1.15
PGK1P00558 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PGK1P00558 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.26■■□□□ 1.15
PGK1P00558 AL049796.1-201ENST00000565336 1766 ntBASIC22.26■■□□□ 1.15
PGK1P00558 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PGK1P00558 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC22.26■■□□□ 1.15
PGK1P00558 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
PGK1P00558 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC22.26■■□□□ 1.15
PGK1P00558 AL121603.2-201ENST00000557373 2117 ntBASIC22.26■■□□□ 1.15
PGK1P00558 WWOX-216ENST00000569818 525 ntBASIC22.26■■□□□ 1.15
PGK1P00558 AC087388.1-201ENST00000571370 1112 ntBASIC22.26■■□□□ 1.15
PGK1P00558 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC22.26■■□□□ 1.15
PGK1P00558 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.26■■□□□ 1.15
PGK1P00558 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
PGK1P00558 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PGK1P00558 FBXW4P1-201ENST00000426721 2239 ntBASIC22.26■■□□□ 1.15
PGK1P00558 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
PGK1P00558 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PGK1P00558 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.25■■□□□ 1.15
PGK1P00558 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PGK1P00558 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PGK1P00558 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PGK1P00558 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PGK1P00558 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PGK1P00558 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PGK1P00558 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC22.25■■□□□ 1.15
PGK1P00558 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC22.25■■□□□ 1.15
PGK1P00558 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
PGK1P00558 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PGK1P00558 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC22.25■■□□□ 1.15
PGK1P00558 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.25■■□□□ 1.15
PGK1P00558 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PGK1P00558 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PGK1P00558 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.25■■□□□ 1.15
PGK1P00558 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PGK1P00558 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC22.24■■□□□ 1.15
PGK1P00558 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PGK1P00558 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
PGK1P00558 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.24■■□□□ 1.15
PGK1P00558 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.24■■□□□ 1.15
PGK1P00558 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PGK1P00558 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC22.24■■□□□ 1.15
PGK1P00558 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PGK1P00558 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PGK1P00558 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.24■■□□□ 1.15
PGK1P00558 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PGK1P00558 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PGK1P00558 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PGK1P00558 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PGK1P00558 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC22.24■■□□□ 1.15
PGK1P00558 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PGK1P00558 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PGK1P00558 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PGK1P00558 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PGK1P00558 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PGK1P00558 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PGK1P00558 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC22.24■■□□□ 1.15
PGK1P00558 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.23■■□□□ 1.15
PGK1P00558 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PGK1P00558 FSCN1P1-201ENST00000568912 1481 ntBASIC22.23■■□□□ 1.15
PGK1P00558 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PGK1P00558 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PGK1P00558 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PGK1P00558 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PGK1P00558 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.23■■□□□ 1.15
PGK1P00558 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PGK1P00558 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC22.23■■□□□ 1.15
PGK1P00558 PRR31-201ENST00000371629 978 ntTSL 2 BASIC22.23■■□□□ 1.15
PGK1P00558 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PGK1P00558 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
PGK1P00558 LIN28AP1-201ENST00000429574 405 ntBASIC22.23■■□□□ 1.15
PGK1P00558 PPP1R14BP5-201ENST00000440334 435 ntBASIC22.23■■□□□ 1.15
PGK1P00558 ECEL1P2-202ENST00000465689 757 ntBASIC22.23■■□□□ 1.15
PGK1P00558 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC22.23■■□□□ 1.15
PGK1P00558 C1QL1P1-201ENST00000568105 661 ntBASIC22.23■■□□□ 1.15
PGK1P00558 AC006011.2-201ENST00000621313 1158 ntBASIC22.23■■□□□ 1.15
PGK1P00558 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
PGK1P00558 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PGK1P00558 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PGK1P00558 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PGK1P00558 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PGK1P00558 KRT8P17-201ENST00000453110 1448 ntBASIC22.23■■□□□ 1.15
PGK1P00558 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PGK1P00558 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.23■■□□□ 1.15
PGK1P00558 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
PGK1P00558 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.22■■□□□ 1.15
PGK1P00558 EP400NL-214ENST00000641289 2402 ntBASIC22.22■■□□□ 1.15
PGK1P00558 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PGK1P00558 AP006587.1-201ENST00000534129 1502 ntBASIC22.22■■□□□ 1.15
PGK1P00558 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms