Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
ALDH1A1P00352 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
ALDH1A1P00352 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
ALDH1A1P00352 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
ALDH1A1P00352 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
ALDH1A1P00352 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
ALDH1A1P00352 AC011558.1-201ENST00000623459 338 ntBASIC22.89■■□□□ 1.25
ALDH1A1P00352 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
ALDH1A1P00352 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.89■■□□□ 1.25
ALDH1A1P00352 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
ALDH1A1P00352 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
ALDH1A1P00352 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.89■■□□□ 1.25
ALDH1A1P00352 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
ALDH1A1P00352 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ALDH1A1P00352 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ALDH1A1P00352 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ALDH1A1P00352 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.88■■□□□ 1.25
ALDH1A1P00352 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
ALDH1A1P00352 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
ALDH1A1P00352 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.88■■□□□ 1.25
ALDH1A1P00352 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.88■■□□□ 1.25
ALDH1A1P00352 CLN6-214ENST00000636314 442 ntTSL 3 BASIC22.88■■□□□ 1.25
ALDH1A1P00352 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ALDH1A1P00352 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
ALDH1A1P00352 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ALDH1A1P00352 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ALDH1A1P00352 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
ALDH1A1P00352 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.87■■□□□ 1.25
ALDH1A1P00352 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.87■■□□□ 1.25
ALDH1A1P00352 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
ALDH1A1P00352 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
ALDH1A1P00352 CD70-202ENST00000423145 881 ntTSL 2 BASIC22.87■■□□□ 1.25
ALDH1A1P00352 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
ALDH1A1P00352 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
ALDH1A1P00352 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.87■■□□□ 1.25
ALDH1A1P00352 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC22.87■■□□□ 1.25
ALDH1A1P00352 CLEC4GP1-201ENST00000596555 870 ntBASIC22.87■■□□□ 1.25
ALDH1A1P00352 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC22.87■■□□□ 1.25
ALDH1A1P00352 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.87■■□□□ 1.25
ALDH1A1P00352 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.87■■□□□ 1.25
ALDH1A1P00352 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ALDH1A1P00352 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ALDH1A1P00352 AC096733.2-201ENST00000609937 1394 ntBASIC22.87■■□□□ 1.25
ALDH1A1P00352 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ALDH1A1P00352 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
ALDH1A1P00352 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ALDH1A1P00352 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
ALDH1A1P00352 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
ALDH1A1P00352 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
ALDH1A1P00352 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ALDH1A1P00352 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ALDH1A1P00352 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ALDH1A1P00352 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC22.86■■□□□ 1.25
ALDH1A1P00352 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC22.86■■□□□ 1.25
ALDH1A1P00352 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.86■■□□□ 1.25
ALDH1A1P00352 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC22.86■■□□□ 1.25
ALDH1A1P00352 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ALDH1A1P00352 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
ALDH1A1P00352 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
ALDH1A1P00352 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ALDH1A1P00352 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ALDH1A1P00352 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ALDH1A1P00352 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ALDH1A1P00352 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC22.85■■□□□ 1.25
ALDH1A1P00352 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ALDH1A1P00352 DAP-202ENST00000432074 1048 ntTSL 2 BASIC22.85■■□□□ 1.25
ALDH1A1P00352 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
ALDH1A1P00352 AC007663.1-201ENST00000438948 1240 ntBASIC22.85■■□□□ 1.25
ALDH1A1P00352 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ALDH1A1P00352 MFAP1P1-201ENST00000442257 1255 ntBASIC22.85■■□□□ 1.25
ALDH1A1P00352 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ALDH1A1P00352 YBX1P10-201ENST00000444752 975 ntBASIC22.85■■□□□ 1.25
ALDH1A1P00352 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
ALDH1A1P00352 AL671277.2-201ENST00000458060 996 ntBASIC22.85■■□□□ 1.25
ALDH1A1P00352 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22.85■■□□□ 1.25
ALDH1A1P00352 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.85■■□□□ 1.25
ALDH1A1P00352 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ALDH1A1P00352 AC011298.2-201ENST00000617989 482 ntBASIC22.85■■□□□ 1.25
ALDH1A1P00352 AC116407.4-201ENST00000623319 1061 ntBASIC22.85■■□□□ 1.25
ALDH1A1P00352 C1orf229-201ENST00000623686 2258 ntBASIC22.85■■□□□ 1.25
ALDH1A1P00352 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ALDH1A1P00352 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.85■■□□□ 1.25
ALDH1A1P00352 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ALDH1A1P00352 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ALDH1A1P00352 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
ALDH1A1P00352 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ALDH1A1P00352 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
ALDH1A1P00352 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC22.84■■□□□ 1.25
ALDH1A1P00352 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ALDH1A1P00352 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC22.84■■□□□ 1.25
ALDH1A1P00352 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC22.84■■□□□ 1.25
ALDH1A1P00352 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
ALDH1A1P00352 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC22.84■■□□□ 1.25
ALDH1A1P00352 TUBB8P6-201ENST00000436895 1288 ntBASIC22.84■■□□□ 1.25
ALDH1A1P00352 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.84■■□□□ 1.25
ALDH1A1P00352 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
ALDH1A1P00352 AC069148.1-201ENST00000608741 768 ntBASIC22.84■■□□□ 1.25
ALDH1A1P00352 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.84■■□□□ 1.25
ALDH1A1P00352 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
ALDH1A1P00352 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms