Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 MKRN4P-201ENST00000444706 1521 ntBASIC19.95■□□□□ 0.78
GPC4O75487 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
GPC4O75487 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.95■□□□□ 0.78
GPC4O75487 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
GPC4O75487 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GPC4O75487 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.95■□□□□ 0.78
GPC4O75487 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GPC4O75487 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
GPC4O75487 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
GPC4O75487 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GPC4O75487 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
GPC4O75487 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
GPC4O75487 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GPC4O75487 GPX1P1-201ENST00000388829 606 ntBASIC19.94■□□□□ 0.78
GPC4O75487 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GPC4O75487 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.94■□□□□ 0.78
GPC4O75487 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GPC4O75487 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.94■□□□□ 0.78
GPC4O75487 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.94■□□□□ 0.78
GPC4O75487 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.94■□□□□ 0.78
GPC4O75487 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
GPC4O75487 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.94■□□□□ 0.78
GPC4O75487 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GPC4O75487 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GPC4O75487 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GPC4O75487 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GPC4O75487 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GPC4O75487 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GPC4O75487 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GPC4O75487 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GPC4O75487 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GPC4O75487 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
GPC4O75487 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GPC4O75487 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GPC4O75487 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GPC4O75487 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
GPC4O75487 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GPC4O75487 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.93■□□□□ 0.78
GPC4O75487 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
GPC4O75487 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
GPC4O75487 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GPC4O75487 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GPC4O75487 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
GPC4O75487 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.93■□□□□ 0.78
GPC4O75487 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GPC4O75487 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
GPC4O75487 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.93■□□□□ 0.78
GPC4O75487 AC105020.6-201ENST00000621523 1217 ntBASIC19.93■□□□□ 0.78
GPC4O75487 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
GPC4O75487 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
GPC4O75487 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GPC4O75487 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
GPC4O75487 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GPC4O75487 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GPC4O75487 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
GPC4O75487 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.93■□□□□ 0.78
GPC4O75487 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.93■□□□□ 0.78
GPC4O75487 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
GPC4O75487 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GPC4O75487 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GPC4O75487 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GPC4O75487 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GPC4O75487 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GPC4O75487 KRT17P1-201ENST00000399211 1546 ntBASIC19.92■□□□□ 0.78
GPC4O75487 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GPC4O75487 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
GPC4O75487 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.92■□□□□ 0.78
GPC4O75487 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GPC4O75487 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.92■□□□□ 0.78
GPC4O75487 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GPC4O75487 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GPC4O75487 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GPC4O75487 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
GPC4O75487 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.92■□□□□ 0.78
GPC4O75487 TSPY6P-201ENST00000448518 926 ntBASIC19.92■□□□□ 0.78
GPC4O75487 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.92■□□□□ 0.78
GPC4O75487 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.92■□□□□ 0.78
GPC4O75487 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.92■□□□□ 0.78
GPC4O75487 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.92■□□□□ 0.78
GPC4O75487 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
GPC4O75487 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.92■□□□□ 0.78
GPC4O75487 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.92■□□□□ 0.78
GPC4O75487 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GPC4O75487 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.92■□□□□ 0.78
GPC4O75487 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC4O75487 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC4O75487 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
GPC4O75487 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GPC4O75487 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.91■□□□□ 0.78
GPC4O75487 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.91■□□□□ 0.78
GPC4O75487 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
GPC4O75487 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.91■□□□□ 0.78
GPC4O75487 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.91■□□□□ 0.78
GPC4O75487 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
GPC4O75487 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
GPC4O75487 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.91■□□□□ 0.78
GPC4O75487 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
GPC4O75487 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.91■□□□□ 0.78
GPC4O75487 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
GPC4O75487 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms