Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
CNOT3O75175 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
CNOT3O75175 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.26■□□□□ 0.67
CNOT3O75175 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.26■□□□□ 0.67
CNOT3O75175 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT3O75175 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT3O75175 AC138932.1-201ENST00000534164 6830 ntBASIC19.26■□□□□ 0.67
CNOT3O75175 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT3O75175 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CNOT3O75175 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.26■□□□□ 0.67
CNOT3O75175 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT3O75175 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT3O75175 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT3O75175 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT3O75175 AC060766.5-201ENST00000590539 871 ntBASIC19.26■□□□□ 0.67
CNOT3O75175 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.26■□□□□ 0.67
CNOT3O75175 AC008403.3-201ENST00000598924 454 ntBASIC19.26■□□□□ 0.67
CNOT3O75175 AC006058.3-201ENST00000606217 1069 ntBASIC19.26■□□□□ 0.67
CNOT3O75175 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.26■□□□□ 0.67
CNOT3O75175 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT3O75175 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CNOT3O75175 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CNOT3O75175 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.26■□□□□ 0.67
CNOT3O75175 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.26■□□□□ 0.67
CNOT3O75175 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT3O75175 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT3O75175 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT3O75175 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT3O75175 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CNOT3O75175 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CNOT3O75175 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.26■□□□□ 0.67
CNOT3O75175 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.25■□□□□ 0.67
CNOT3O75175 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT3O75175 AC087633.2-202ENST00000565166 1439 ntBASIC19.25■□□□□ 0.67
CNOT3O75175 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.25■□□□□ 0.67
CNOT3O75175 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT3O75175 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT3O75175 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CNOT3O75175 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CNOT3O75175 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT3O75175 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CNOT3O75175 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.25■□□□□ 0.67
CNOT3O75175 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.25■□□□□ 0.67
CNOT3O75175 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.25■□□□□ 0.67
CNOT3O75175 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CNOT3O75175 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.25■□□□□ 0.67
CNOT3O75175 AC026366.1-201ENST00000488803 879 ntBASIC19.25■□□□□ 0.67
CNOT3O75175 AP003097.1-201ENST00000530657 1135 ntBASIC19.25■□□□□ 0.67
CNOT3O75175 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CNOT3O75175 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
CNOT3O75175 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT3O75175 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT3O75175 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CNOT3O75175 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT3O75175 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CNOT3O75175 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT3O75175 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.25■□□□□ 0.67
CNOT3O75175 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CNOT3O75175 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CNOT3O75175 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CNOT3O75175 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CNOT3O75175 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CNOT3O75175 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.24■□□□□ 0.67
CNOT3O75175 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT3O75175 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT3O75175 AC128676.1-201ENST00000454392 318 ntBASIC19.24■□□□□ 0.67
CNOT3O75175 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.24■□□□□ 0.67
CNOT3O75175 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.24■□□□□ 0.67
CNOT3O75175 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.24■□□□□ 0.67
CNOT3O75175 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CNOT3O75175 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT3O75175 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT3O75175 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT3O75175 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT3O75175 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.24■□□□□ 0.67
CNOT3O75175 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT3O75175 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT3O75175 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CNOT3O75175 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT3O75175 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT3O75175 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT3O75175 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
CNOT3O75175 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.23■□□□□ 0.67
CNOT3O75175 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
CNOT3O75175 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CNOT3O75175 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CNOT3O75175 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT3O75175 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT3O75175 RPS2P52-201ENST00000469610 820 ntBASIC19.23■□□□□ 0.67
CNOT3O75175 PNMA6B-201ENST00000538162 1200 ntBASIC19.23■□□□□ 0.67
CNOT3O75175 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT3O75175 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT3O75175 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT3O75175 AC026471.1-201ENST00000564629 3026 ntBASIC19.23■□□□□ 0.67
CNOT3O75175 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT3O75175 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.23■□□□□ 0.67
CNOT3O75175 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT3O75175 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT3O75175 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT3O75175 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms