Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.9■□□□□ 0.62
SCN2BO60939 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.9■□□□□ 0.62
SCN2BO60939 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.9■□□□□ 0.62
SCN2BO60939 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SCN2BO60939 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN2BO60939 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN2BO60939 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN2BO60939 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN2BO60939 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN2BO60939 KRT8P17-201ENST00000453110 1448 ntBASIC18.9■□□□□ 0.62
SCN2BO60939 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN2BO60939 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCN2BO60939 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.89■□□□□ 0.62
SCN2BO60939 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
SCN2BO60939 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SCN2BO60939 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SCN2BO60939 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SCN2BO60939 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCN2BO60939 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.89■□□□□ 0.61
SCN2BO60939 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
SCN2BO60939 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SCN2BO60939 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN2BO60939 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SCN2BO60939 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SCN2BO60939 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN2BO60939 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN2BO60939 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.89■□□□□ 0.61
SCN2BO60939 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN2BO60939 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SCN2BO60939 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.89■□□□□ 0.61
SCN2BO60939 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
SCN2BO60939 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN2BO60939 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN2BO60939 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCN2BO60939 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN2BO60939 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN2BO60939 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN2BO60939 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.89■□□□□ 0.61
SCN2BO60939 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN2BO60939 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN2BO60939 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.88■□□□□ 0.61
SCN2BO60939 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN2BO60939 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCN2BO60939 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN2BO60939 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN2BO60939 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.88■□□□□ 0.61
SCN2BO60939 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
SCN2BO60939 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SCN2BO60939 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.88■□□□□ 0.61
SCN2BO60939 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.88■□□□□ 0.61
SCN2BO60939 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN2BO60939 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SCN2BO60939 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCN2BO60939 AC009237.14-201ENST00000609975 1594 ntBASIC18.88■□□□□ 0.61
SCN2BO60939 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN2BO60939 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCN2BO60939 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN2BO60939 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN2BO60939 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
SCN2BO60939 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN2BO60939 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN2BO60939 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN2BO60939 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN2BO60939 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCN2BO60939 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCN2BO60939 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SCN2BO60939 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.87■□□□□ 0.61
SCN2BO60939 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.87■□□□□ 0.61
SCN2BO60939 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.87■□□□□ 0.61
SCN2BO60939 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.87■□□□□ 0.61
SCN2BO60939 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.87■□□□□ 0.61
SCN2BO60939 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.87■□□□□ 0.61
SCN2BO60939 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SCN2BO60939 AC105020.6-201ENST00000621523 1217 ntBASIC18.87■□□□□ 0.61
SCN2BO60939 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN2BO60939 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCN2BO60939 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN2BO60939 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCN2BO60939 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.86■□□□□ 0.61
SCN2BO60939 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN2BO60939 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN2BO60939 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SCN2BO60939 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCN2BO60939 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.86■□□□□ 0.61
SCN2BO60939 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCN2BO60939 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN2BO60939 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SCN2BO60939 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN2BO60939 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN2BO60939 KRT18P68-201ENST00000392293 1000 ntBASIC18.86■□□□□ 0.61
SCN2BO60939 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN2BO60939 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.86■□□□□ 0.61
SCN2BO60939 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.86■□□□□ 0.61
SCN2BO60939 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SCN2BO60939 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.86■□□□□ 0.61
SCN2BO60939 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
SCN2BO60939 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCN2BO60939 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.86■□□□□ 0.61
SCN2BO60939 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN2BO60939 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms