Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEF11O60813 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEF11O60813 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.27■□□□□ 0.84
PRAMEF11O60813 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.27■□□□□ 0.84
PRAMEF11O60813 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.27■□□□□ 0.84
PRAMEF11O60813 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEF11O60813 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEF11O60813 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEF11O60813 TCF3P1-201ENST00000423021 1937 ntBASIC20.27■□□□□ 0.84
PRAMEF11O60813 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
PRAMEF11O60813 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PRAMEF11O60813 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF11O60813 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.26■□□□□ 0.83
PRAMEF11O60813 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.26■□□□□ 0.83
PRAMEF11O60813 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF11O60813 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF11O60813 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF11O60813 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.26■□□□□ 0.83
PRAMEF11O60813 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.26■□□□□ 0.83
PRAMEF11O60813 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF11O60813 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.26■□□□□ 0.83
PRAMEF11O60813 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.26■□□□□ 0.83
PRAMEF11O60813 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF11O60813 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF11O60813 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF11O60813 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
PRAMEF11O60813 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.26■□□□□ 0.83
PRAMEF11O60813 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF11O60813 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.25■□□□□ 0.83
PRAMEF11O60813 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.25■□□□□ 0.83
PRAMEF11O60813 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
PRAMEF11O60813 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
PRAMEF11O60813 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF11O60813 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF11O60813 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF11O60813 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.25■□□□□ 0.83
PRAMEF11O60813 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.25■□□□□ 0.83
PRAMEF11O60813 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
PRAMEF11O60813 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.25■□□□□ 0.83
PRAMEF11O60813 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF11O60813 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF11O60813 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF11O60813 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF11O60813 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.25■□□□□ 0.83
PRAMEF11O60813 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF11O60813 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF11O60813 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
PRAMEF11O60813 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF11O60813 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.25■□□□□ 0.83
PRAMEF11O60813 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF11O60813 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PRAMEF11O60813 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PRAMEF11O60813 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF11O60813 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.25■□□□□ 0.83
PRAMEF11O60813 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF11O60813 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF11O60813 PHGDH-210ENST00000641115 1638 ntBASIC20.24■□□□□ 0.83
PRAMEF11O60813 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF11O60813 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF11O60813 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.24■□□□□ 0.83
PRAMEF11O60813 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF11O60813 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF11O60813 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF11O60813 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.24■□□□□ 0.83
PRAMEF11O60813 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF11O60813 KRT17P3-201ENST00000420566 1262 ntBASIC20.24■□□□□ 0.83
PRAMEF11O60813 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF11O60813 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.24■□□□□ 0.83
PRAMEF11O60813 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.24■□□□□ 0.83
PRAMEF11O60813 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.24■□□□□ 0.83
PRAMEF11O60813 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF11O60813 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.24■□□□□ 0.83
PRAMEF11O60813 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PRAMEF11O60813 AC006058.3-201ENST00000606217 1069 ntBASIC20.24■□□□□ 0.83
PRAMEF11O60813 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF11O60813 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF11O60813 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF11O60813 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF11O60813 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
PRAMEF11O60813 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PRAMEF11O60813 AC112907.3-201ENST00000577781 2400 ntBASIC20.24■□□□□ 0.83
PRAMEF11O60813 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF11O60813 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PRAMEF11O60813 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF11O60813 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF11O60813 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.23■□□□□ 0.83
PRAMEF11O60813 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF11O60813 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF11O60813 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF11O60813 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF11O60813 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
PRAMEF11O60813 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.23■□□□□ 0.83
PRAMEF11O60813 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.23■□□□□ 0.83
PRAMEF11O60813 FAM201B-201ENST00000458407 597 ntBASIC20.23■□□□□ 0.83
PRAMEF11O60813 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF11O60813 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PRAMEF11O60813 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF11O60813 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF11O60813 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF11O60813 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms