Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
GMDSO60547 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.59■□□□□ 0.41
GMDSO60547 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
GMDSO60547 AC007322.4-201ENST00000509611 723 ntBASIC17.59■□□□□ 0.41
GMDSO60547 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.59■□□□□ 0.41
GMDSO60547 AL162412.1-201ENST00000567129 965 ntBASIC17.59■□□□□ 0.41
GMDSO60547 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.59■□□□□ 0.41
GMDSO60547 AL591742.1-201ENST00000604433 565 ntBASIC17.59■□□□□ 0.41
GMDSO60547 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GMDSO60547 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
GMDSO60547 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GMDSO60547 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.59■□□□□ 0.41
GMDSO60547 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
GMDSO60547 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
GMDSO60547 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
GMDSO60547 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GMDSO60547 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
GMDSO60547 AC125437.2-201ENST00000625180 2167 ntBASIC17.59■□□□□ 0.41
GMDSO60547 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GMDSO60547 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.59■□□□□ 0.41
GMDSO60547 TNXA-203ENST00000507684 2038 ntBASIC17.59■□□□□ 0.41
GMDSO60547 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GMDSO60547 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GMDSO60547 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
GMDSO60547 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
GMDSO60547 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GMDSO60547 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GMDSO60547 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
GMDSO60547 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.58■□□□□ 0.4
GMDSO60547 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.58■□□□□ 0.4
GMDSO60547 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.58■□□□□ 0.4
GMDSO60547 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.58■□□□□ 0.4
GMDSO60547 AC007322.3-201ENST00000426526 701 ntBASIC17.58■□□□□ 0.4
GMDSO60547 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GMDSO60547 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.58■□□□□ 0.4
GMDSO60547 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.58■□□□□ 0.4
GMDSO60547 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.58■□□□□ 0.4
GMDSO60547 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GMDSO60547 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.58■□□□□ 0.4
GMDSO60547 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GMDSO60547 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
GMDSO60547 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.57■□□□□ 0.4
GMDSO60547 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GMDSO60547 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GMDSO60547 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
GMDSO60547 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GMDSO60547 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.57■□□□□ 0.4
GMDSO60547 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GMDSO60547 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GMDSO60547 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.57■□□□□ 0.4
GMDSO60547 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GMDSO60547 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GMDSO60547 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
GMDSO60547 DUX4L16-201ENST00000555130 1264 ntBASIC17.57■□□□□ 0.4
GMDSO60547 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.57■□□□□ 0.4
GMDSO60547 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.57■□□□□ 0.4
GMDSO60547 MIR2861-201ENST00000636310 90 ntBASIC17.57■□□□□ 0.4
GMDSO60547 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GMDSO60547 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GMDSO60547 AC092720.2-201ENST00000602388 1665 ntBASIC17.57■□□□□ 0.4
GMDSO60547 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GMDSO60547 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GMDSO60547 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.57■□□□□ 0.4
GMDSO60547 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GMDSO60547 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMDSO60547 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GMDSO60547 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMDSO60547 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
GMDSO60547 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMDSO60547 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GMDSO60547 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMDSO60547 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.56■□□□□ 0.4
GMDSO60547 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GMDSO60547 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
GMDSO60547 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMDSO60547 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMDSO60547 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMDSO60547 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.56■□□□□ 0.4
GMDSO60547 AL137784.2-201ENST00000607332 1000 ntBASIC17.56■□□□□ 0.4
GMDSO60547 AC231657.2-201ENST00000624556 255 ntBASIC17.56■□□□□ 0.4
GMDSO60547 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
GMDSO60547 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMDSO60547 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
GMDSO60547 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.56■□□□□ 0.4
GMDSO60547 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMDSO60547 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GMDSO60547 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
GMDSO60547 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
GMDSO60547 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
GMDSO60547 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
GMDSO60547 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
GMDSO60547 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.56■□□□□ 0.4
GMDSO60547 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMDSO60547 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.56■□□□□ 0.4
GMDSO60547 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
GMDSO60547 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMDSO60547 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.56■□□□□ 0.4
GMDSO60547 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GMDSO60547 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
GMDSO60547 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms