Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.98■□□□□ 0.47
ZIC3O60481 AL391422.3-201ENST00000603791 2761 ntBASIC17.97■□□□□ 0.47
ZIC3O60481 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZIC3O60481 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.97■□□□□ 0.47
ZIC3O60481 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZIC3O60481 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZIC3O60481 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.97■□□□□ 0.47
ZIC3O60481 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZIC3O60481 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZIC3O60481 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZIC3O60481 AL158047.1-201ENST00000445918 881 ntBASIC17.97■□□□□ 0.47
ZIC3O60481 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.97■□□□□ 0.47
ZIC3O60481 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.97■□□□□ 0.47
ZIC3O60481 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.97■□□□□ 0.47
ZIC3O60481 AL023875.1-201ENST00000640777 796 ntBASIC17.97■□□□□ 0.47
ZIC3O60481 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZIC3O60481 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZIC3O60481 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZIC3O60481 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.97■□□□□ 0.47
ZIC3O60481 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.97■□□□□ 0.47
ZIC3O60481 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.97■□□□□ 0.47
ZIC3O60481 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZIC3O60481 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZIC3O60481 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZIC3O60481 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZIC3O60481 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZIC3O60481 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZIC3O60481 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZIC3O60481 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZIC3O60481 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ZIC3O60481 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZIC3O60481 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZIC3O60481 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZIC3O60481 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZIC3O60481 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZIC3O60481 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
ZIC3O60481 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.96■□□□□ 0.47
ZIC3O60481 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.96■□□□□ 0.47
ZIC3O60481 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZIC3O60481 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.96■□□□□ 0.47
ZIC3O60481 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.96■□□□□ 0.47
ZIC3O60481 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.96■□□□□ 0.47
ZIC3O60481 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
ZIC3O60481 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.96■□□□□ 0.47
ZIC3O60481 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ZIC3O60481 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZIC3O60481 AL121906.2-201ENST00000621597 723 ntBASIC17.96■□□□□ 0.47
ZIC3O60481 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZIC3O60481 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZIC3O60481 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZIC3O60481 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZIC3O60481 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
ZIC3O60481 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZIC3O60481 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZIC3O60481 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZIC3O60481 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZIC3O60481 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.96■□□□□ 0.47
ZIC3O60481 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.46
ZIC3O60481 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
ZIC3O60481 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
ZIC3O60481 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.96■□□□□ 0.46
ZIC3O60481 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
ZIC3O60481 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ZIC3O60481 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZIC3O60481 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.95■□□□□ 0.46
ZIC3O60481 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZIC3O60481 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZIC3O60481 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.95■□□□□ 0.46
ZIC3O60481 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZIC3O60481 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZIC3O60481 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZIC3O60481 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZIC3O60481 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZIC3O60481 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZIC3O60481 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZIC3O60481 AC133681.1-201ENST00000465482 601 ntBASIC17.95■□□□□ 0.46
ZIC3O60481 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
ZIC3O60481 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.95■□□□□ 0.46
ZIC3O60481 AC124016.1-201ENST00000609552 612 ntBASIC17.95■□□□□ 0.46
ZIC3O60481 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZIC3O60481 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZIC3O60481 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZIC3O60481 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZIC3O60481 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
ZIC3O60481 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ZIC3O60481 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZIC3O60481 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZIC3O60481 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.94■□□□□ 0.46
ZIC3O60481 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZIC3O60481 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
ZIC3O60481 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZIC3O60481 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZIC3O60481 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZIC3O60481 AC099778.1-201ENST00000568593 1911 ntBASIC17.94■□□□□ 0.46
ZIC3O60481 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZIC3O60481 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.94■□□□□ 0.46
ZIC3O60481 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
ZIC3O60481 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZIC3O60481 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZIC3O60481 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms