Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA12O60330 FEM1AP4-201ENST00000443167 1987 ntBASIC19.79■□□□□ 0.76
PCDHGA12O60330 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHGA12O60330 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
PCDHGA12O60330 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA12O60330 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHGA12O60330 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA12O60330 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA12O60330 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA12O60330 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA12O60330 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PCDHGA12O60330 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.78■□□□□ 0.76
PCDHGA12O60330 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
PCDHGA12O60330 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHGA12O60330 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHGA12O60330 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
PCDHGA12O60330 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHGA12O60330 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA12O60330 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHGA12O60330 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA12O60330 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA12O60330 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA12O60330 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA12O60330 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
PCDHGA12O60330 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA12O60330 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHGA12O60330 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA12O60330 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA12O60330 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA12O60330 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA12O60330 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA12O60330 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA12O60330 RCN1P1-201ENST00000400413 996 ntBASIC19.77■□□□□ 0.76
PCDHGA12O60330 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA12O60330 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.77■□□□□ 0.76
PCDHGA12O60330 AL353807.1-201ENST00000427475 662 ntBASIC19.77■□□□□ 0.76
PCDHGA12O60330 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
PCDHGA12O60330 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHGA12O60330 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHGA12O60330 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA12O60330 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHGA12O60330 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.77■□□□□ 0.76
PCDHGA12O60330 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHGA12O60330 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA12O60330 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDHGA12O60330 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
PCDHGA12O60330 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
PCDHGA12O60330 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA12O60330 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PCDHGA12O60330 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGA12O60330 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PCDHGA12O60330 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGA12O60330 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
PCDHGA12O60330 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA12O60330 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PCDHGA12O60330 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA12O60330 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGA12O60330 KRT16P5-201ENST00000455284 522 ntBASIC19.76■□□□□ 0.75
PCDHGA12O60330 AC023632.3-201ENST00000521633 145 ntBASIC19.76■□□□□ 0.75
PCDHGA12O60330 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PCDHGA12O60330 AP003071.4-201ENST00000562276 1284 ntBASIC19.76■□□□□ 0.75
PCDHGA12O60330 AF186192.3-201ENST00000583427 947 ntBASIC19.76■□□□□ 0.75
PCDHGA12O60330 AL353708.3-201ENST00000610272 989 ntBASIC19.76■□□□□ 0.75
PCDHGA12O60330 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA12O60330 AL121603.2-201ENST00000557373 2117 ntBASIC19.76■□□□□ 0.75
PCDHGA12O60330 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA12O60330 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA12O60330 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA12O60330 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PCDHGA12O60330 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA12O60330 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA12O60330 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA12O60330 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA12O60330 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA12O60330 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA12O60330 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA12O60330 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA12O60330 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHGA12O60330 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA12O60330 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA12O60330 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDHGA12O60330 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHGA12O60330 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHGA12O60330 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA12O60330 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA12O60330 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA12O60330 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHGA12O60330 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PCDHGA12O60330 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHGA12O60330 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA12O60330 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA12O60330 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA12O60330 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDHGA12O60330 AL355355.2-201ENST00000442321 338 ntBASIC19.74■□□□□ 0.75
PCDHGA12O60330 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDHGA12O60330 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHGA12O60330 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PCDHGA12O60330 CD177P1-201ENST00000606252 935 ntBASIC19.74■□□□□ 0.75
PCDHGA12O60330 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA12O60330 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms