Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TO15178 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TO15178 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TO15178 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TO15178 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.38■□□□□ 0.53
TO15178 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
TO15178 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
TO15178 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.38■□□□□ 0.53
TO15178 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.38■□□□□ 0.53
TO15178 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.38■□□□□ 0.53
TO15178 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.38■□□□□ 0.53
TO15178 AC008403.3-201ENST00000598924 454 ntBASIC18.38■□□□□ 0.53
TO15178 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TO15178 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TO15178 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
TO15178 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.38■□□□□ 0.53
TO15178 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TO15178 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TO15178 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TO15178 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TO15178 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TO15178 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TO15178 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TO15178 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TO15178 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TO15178 AC026366.1-201ENST00000488803 879 ntBASIC18.37■□□□□ 0.53
TO15178 AP003097.1-201ENST00000530657 1135 ntBASIC18.37■□□□□ 0.53
TO15178 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TO15178 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.37■□□□□ 0.53
TO15178 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.37■□□□□ 0.53
TO15178 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TO15178 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TO15178 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.37■□□□□ 0.53
TO15178 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TO15178 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TO15178 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TO15178 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TO15178 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TO15178 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TO15178 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TO15178 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TO15178 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TO15178 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TO15178 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TO15178 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TO15178 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.36■□□□□ 0.53
TO15178 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.36■□□□□ 0.53
TO15178 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.36■□□□□ 0.53
TO15178 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TO15178 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.36■□□□□ 0.53
TO15178 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TO15178 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.36■□□□□ 0.53
TO15178 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
TO15178 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.35■□□□□ 0.53
TO15178 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TO15178 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TO15178 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TO15178 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TO15178 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TO15178 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TO15178 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.35■□□□□ 0.53
TO15178 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.35■□□□□ 0.53
TO15178 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TO15178 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TO15178 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TO15178 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TO15178 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.35■□□□□ 0.53
TO15178 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.35■□□□□ 0.53
TO15178 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.35■□□□□ 0.53
TO15178 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TO15178 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.35■□□□□ 0.53
TO15178 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.35■□□□□ 0.53
TO15178 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TO15178 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TO15178 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TO15178 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TO15178 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TO15178 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TO15178 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TO15178 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TO15178 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TO15178 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.34■□□□□ 0.53
TO15178 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TO15178 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TO15178 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TO15178 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TO15178 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.34■□□□□ 0.53
TO15178 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TO15178 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TO15178 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TO15178 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.34■□□□□ 0.53
TO15178 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
TO15178 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.34■□□□□ 0.53
TO15178 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TO15178 POM121L13P-201ENST00000422362 380 ntBASIC18.34■□□□□ 0.53
TO15178 RPS2P52-201ENST00000469610 820 ntBASIC18.34■□□□□ 0.53
TO15178 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.34■□□□□ 0.53
TO15178 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TO15178 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TO15178 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms