Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.59■□□□□ 0.57
AP3D1O14617 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3D1O14617 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3D1O14617 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3D1O14617 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
AP3D1O14617 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3D1O14617 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
AP3D1O14617 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3D1O14617 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
AP3D1O14617 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3D1O14617 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.59■□□□□ 0.57
AP3D1O14617 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.59■□□□□ 0.57
AP3D1O14617 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.59■□□□□ 0.57
AP3D1O14617 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.59■□□□□ 0.57
AP3D1O14617 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.59■□□□□ 0.57
AP3D1O14617 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3D1O14617 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3D1O14617 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3D1O14617 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
AP3D1O14617 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3D1O14617 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3D1O14617 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3D1O14617 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP3D1O14617 CYP21A1P-202ENST00000354927 1481 ntBASIC18.58■□□□□ 0.57
AP3D1O14617 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.58■□□□□ 0.57
AP3D1O14617 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.58■□□□□ 0.57
AP3D1O14617 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.58■□□□□ 0.57
AP3D1O14617 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
AP3D1O14617 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
AP3D1O14617 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.58■□□□□ 0.57
AP3D1O14617 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP3D1O14617 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.58■□□□□ 0.56
AP3D1O14617 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP3D1O14617 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.58■□□□□ 0.56
AP3D1O14617 AC004911.1-201ENST00000416316 871 ntBASIC18.58■□□□□ 0.56
AP3D1O14617 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.58■□□□□ 0.56
AP3D1O14617 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.58■□□□□ 0.56
AP3D1O14617 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.58■□□□□ 0.56
AP3D1O14617 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.58■□□□□ 0.56
AP3D1O14617 AL162412.1-201ENST00000567129 965 ntBASIC18.58■□□□□ 0.56
AP3D1O14617 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
AP3D1O14617 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP3D1O14617 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP3D1O14617 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP3D1O14617 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.58■□□□□ 0.56
AP3D1O14617 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.58■□□□□ 0.56
AP3D1O14617 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP3D1O14617 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP3D1O14617 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.58■□□□□ 0.56
AP3D1O14617 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
AP3D1O14617 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3D1O14617 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3D1O14617 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.57■□□□□ 0.56
AP3D1O14617 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3D1O14617 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3D1O14617 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
AP3D1O14617 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.57■□□□□ 0.56
AP3D1O14617 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3D1O14617 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
AP3D1O14617 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3D1O14617 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3D1O14617 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
AP3D1O14617 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3D1O14617 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3D1O14617 CYP2T1P-201ENST00000432607 1285 ntBASIC18.57■□□□□ 0.56
AP3D1O14617 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.57■□□□□ 0.56
AP3D1O14617 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.57■□□□□ 0.56
AP3D1O14617 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3D1O14617 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.57■□□□□ 0.56
AP3D1O14617 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
AP3D1O14617 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3D1O14617 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
AP3D1O14617 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3D1O14617 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.57■□□□□ 0.56
AP3D1O14617 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP3D1O14617 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.57■□□□□ 0.56
AP3D1O14617 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3D1O14617 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP3D1O14617 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.56■□□□□ 0.56
AP3D1O14617 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP3D1O14617 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
AP3D1O14617 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.56■□□□□ 0.56
AP3D1O14617 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP3D1O14617 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
AP3D1O14617 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP3D1O14617 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP3D1O14617 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP3D1O14617 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.56■□□□□ 0.56
AP3D1O14617 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP3D1O14617 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP3D1O14617 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP3D1O14617 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP3D1O14617 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP3D1O14617 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
AP3D1O14617 RARRES2P4-201ENST00000514074 484 ntBASIC18.56■□□□□ 0.56
AP3D1O14617 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP3D1O14617 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.56■□□□□ 0.56
AP3D1O14617 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
AP3D1O14617 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP3D1O14617 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms