Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM38O00635 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM38O00635 AC116050.2-201ENST00000612102 1779 ntBASIC20.03■□□□□ 0.8
TRIM38O00635 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
TRIM38O00635 AL391422.3-201ENST00000603791 2761 ntBASIC20.03■□□□□ 0.8
TRIM38O00635 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM38O00635 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM38O00635 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM38O00635 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM38O00635 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM38O00635 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM38O00635 Z99916.2-201ENST00000604037 246 ntBASIC20.03■□□□□ 0.8
TRIM38O00635 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
TRIM38O00635 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRIM38O00635 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM38O00635 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM38O00635 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRIM38O00635 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM38O00635 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM38O00635 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM38O00635 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM38O00635 AFG3L1P-217ENST00000557444 2447 ntBASIC20.03■□□□□ 0.8
TRIM38O00635 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM38O00635 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRIM38O00635 PLK5-205ENST00000642079 1969 ntBASIC20.03■□□□□ 0.8
TRIM38O00635 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TRIM38O00635 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TRIM38O00635 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM38O00635 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM38O00635 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM38O00635 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM38O00635 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TRIM38O00635 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TRIM38O00635 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM38O00635 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.02■□□□□ 0.8
TRIM38O00635 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM38O00635 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM38O00635 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM38O00635 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM38O00635 MIR718-201ENST00000390190 70 ntBASIC20.02■□□□□ 0.8
TRIM38O00635 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM38O00635 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM38O00635 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM38O00635 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.02■□□□□ 0.8
TRIM38O00635 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM38O00635 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM38O00635 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM38O00635 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM38O00635 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM38O00635 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM38O00635 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM38O00635 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM38O00635 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TRIM38O00635 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRIM38O00635 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM38O00635 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM38O00635 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TRIM38O00635 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM38O00635 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
TRIM38O00635 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM38O00635 C2orf69P4-201ENST00000565394 541 ntBASIC20.01■□□□□ 0.79
TRIM38O00635 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM38O00635 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM38O00635 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM38O00635 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM38O00635 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM38O00635 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20■□□□□ 0.79
TRIM38O00635 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM38O00635 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM38O00635 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM38O00635 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
TRIM38O00635 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM38O00635 POM121L13P-201ENST00000422362 380 ntBASIC20■□□□□ 0.79
TRIM38O00635 MIR4497-201ENST00000583208 89 ntBASIC20■□□□□ 0.79
TRIM38O00635 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20■□□□□ 0.79
TRIM38O00635 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM38O00635 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM38O00635 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20■□□□□ 0.79
TRIM38O00635 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TRIM38O00635 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20■□□□□ 0.79
TRIM38O00635 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20■□□□□ 0.79
TRIM38O00635 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20■□□□□ 0.79
TRIM38O00635 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM38O00635 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM38O00635 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM38O00635 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TRIM38O00635 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM38O00635 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRIM38O00635 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM38O00635 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM38O00635 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM38O00635 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM38O00635 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TRIM38O00635 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM38O00635 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM38O00635 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
TRIM38O00635 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TRIM38O00635 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM38O00635 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.99■□□□□ 0.79
TRIM38O00635 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms