Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TNFRSF11BO00300 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 Z82202.1-201ENST00000623446 1880 ntBASIC18.41■□□□□ 0.54
TNFRSF11BO00300 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 PGM5P4-201ENST00000421970 445 ntBASIC18.41■□□□□ 0.54
TNFRSF11BO00300 AC142381.2-201ENST00000566120 298 ntBASIC18.41■□□□□ 0.54
TNFRSF11BO00300 SLC7A5P1-201ENST00000568957 537 ntBASIC18.41■□□□□ 0.54
TNFRSF11BO00300 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.41■□□□□ 0.54
TNFRSF11BO00300 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF11BO00300 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.39■□□□□ 0.54
TNFRSF11BO00300 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.39■□□□□ 0.54
TNFRSF11BO00300 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TNFRSF11BO00300 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
TNFRSF11BO00300 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.39■□□□□ 0.53
TNFRSF11BO00300 AC097381.1-201ENST00000429019 1296 ntBASIC18.39■□□□□ 0.53
TNFRSF11BO00300 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TNFRSF11BO00300 AL356652.1-201ENST00000615962 565 ntBASIC18.39■□□□□ 0.53
TNFRSF11BO00300 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.39■□□□□ 0.53
TNFRSF11BO00300 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.39■□□□□ 0.53
TNFRSF11BO00300 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFRSF11BO00300 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TNFRSF11BO00300 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFRSF11BO00300 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.39■□□□□ 0.53
TNFRSF11BO00300 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TNFRSF11BO00300 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TNFRSF11BO00300 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFRSF11BO00300 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFRSF11BO00300 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFRSF11BO00300 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFRSF11BO00300 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFRSF11BO00300 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
TNFRSF11BO00300 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 AC009237.14-201ENST00000609975 1594 ntBASIC18.38■□□□□ 0.53
TNFRSF11BO00300 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms