Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LINC00473A8K010 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00473A8K010 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00473A8K010 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00473A8K010 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC00473A8K010 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC00473A8K010 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LINC00473A8K010 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00473A8K010 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC00473A8K010 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC00473A8K010 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.22■□□□□ 0.19
LINC00473A8K010 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
LINC00473A8K010 AL031963.3-201ENST00000606441 850 ntBASIC16.22■□□□□ 0.19
LINC00473A8K010 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00473A8K010 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00473A8K010 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC00473A8K010 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC00473A8K010 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00473A8K010 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC00473A8K010 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00473A8K010 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00473A8K010 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00473A8K010 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00473A8K010 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00473A8K010 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00473A8K010 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00473A8K010 AL355472.2-201ENST00000422958 438 ntBASIC16.21■□□□□ 0.19
LINC00473A8K010 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC00473A8K010 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.21■□□□□ 0.19
LINC00473A8K010 CYP2T3P-201ENST00000601990 817 ntBASIC16.21■□□□□ 0.19
LINC00473A8K010 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.21■□□□□ 0.19
LINC00473A8K010 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00473A8K010 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
LINC00473A8K010 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00473A8K010 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.21■□□□□ 0.19
LINC00473A8K010 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.21■□□□□ 0.19
LINC00473A8K010 AC093484.2-201ENST00000580996 2166 ntBASIC16.21■□□□□ 0.19
LINC00473A8K010 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00473A8K010 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00473A8K010 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00473A8K010 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00473A8K010 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LINC00473A8K010 AC009237.14-201ENST00000609975 1594 ntBASIC16.21■□□□□ 0.18
LINC00473A8K010 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LINC00473A8K010 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC00473A8K010 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC00473A8K010 KRT8P20-201ENST00000423953 1409 ntBASIC16.2■□□□□ 0.18
LINC00473A8K010 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00473A8K010 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC00473A8K010 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.2■□□□□ 0.18
LINC00473A8K010 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00473A8K010 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00473A8K010 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.2■□□□□ 0.18
LINC00473A8K010 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.2■□□□□ 0.18
LINC00473A8K010 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC00473A8K010 AC069236.1-201ENST00000604339 616 ntBASIC16.2■□□□□ 0.18
LINC00473A8K010 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC00473A8K010 BID-214ENST00000617586 542 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC00473A8K010 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00473A8K010 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00473A8K010 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00473A8K010 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
LINC00473A8K010 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00473A8K010 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00473A8K010 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC00473A8K010 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC00473A8K010 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00473A8K010 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC00473A8K010 KRT16P6-202ENST00000425692 1426 ntBASIC16.19■□□□□ 0.18
LINC00473A8K010 AC005332.7-201ENST00000614046 2005 ntBASIC16.19■□□□□ 0.18
LINC00473A8K010 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC00473A8K010 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00473A8K010 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00473A8K010 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LINC00473A8K010 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00473A8K010 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LINC00473A8K010 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00473A8K010 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC00473A8K010 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00473A8K010 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00473A8K010 AC231657.2-201ENST00000624556 255 ntBASIC16.19■□□□□ 0.18
LINC00473A8K010 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00473A8K010 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00473A8K010 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC00473A8K010 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00473A8K010 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00473A8K010 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00473A8K010 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00473A8K010 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00473A8K010 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00473A8K010 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00473A8K010 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00473A8K010 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00473A8K010 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
LINC00473A8K010 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00473A8K010 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00473A8K010 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
LINC00473A8K010 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LINC00473A8K010 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00473A8K010 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms