Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
PRAMEF25A6NGN4 AC087289.5-201ENST00000586076 3175 ntBASIC18.71■□□□□ 0.58
PRAMEF25A6NGN4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.71■□□□□ 0.58
PRAMEF25A6NGN4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.58
PRAMEF25A6NGN4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 AC105020.6-201ENST00000621523 1217 ntBASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.7■□□□□ 0.58
PRAMEF25A6NGN4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PRAMEF25A6NGN4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PRAMEF25A6NGN4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF25A6NGN4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF25A6NGN4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.69■□□□□ 0.58
PRAMEF25A6NGN4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PRAMEF25A6NGN4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.69■□□□□ 0.58
PRAMEF25A6NGN4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
PRAMEF25A6NGN4 AL356652.1-201ENST00000615962 565 ntBASIC18.69■□□□□ 0.58
PRAMEF25A6NGN4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.69■□□□□ 0.58
PRAMEF25A6NGN4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF25A6NGN4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF25A6NGN4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.69■□□□□ 0.58
PRAMEF25A6NGN4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.69■□□□□ 0.58
PRAMEF25A6NGN4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF25A6NGN4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 AC098934.4-201ENST00000564127 592 ntBASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF25A6NGN4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 AC069152.1-201ENST00000438030 544 ntBASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.67■□□□□ 0.58
PRAMEF25A6NGN4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms