Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RBFOX3A6NFN3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 KRT8P33-201ENST00000508125 1423 ntBASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
RBFOX3A6NFN3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RBFOX3A6NFN3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.72■□□□□ 0.11
RBFOX3A6NFN3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RBFOX3A6NFN3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RBFOX3A6NFN3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RBFOX3A6NFN3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RBFOX3A6NFN3 YBX1P4-201ENST00000392794 808 ntBASIC15.72■□□□□ 0.11
RBFOX3A6NFN3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC15.72■□□□□ 0.11
RBFOX3A6NFN3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.72■□□□□ 0.11
RBFOX3A6NFN3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RBFOX3A6NFN3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RBFOX3A6NFN3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RBFOX3A6NFN3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RBFOX3A6NFN3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RBFOX3A6NFN3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.72■□□□□ 0.11
RBFOX3A6NFN3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RBFOX3A6NFN3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RBFOX3A6NFN3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 AC103834.1-201ENST00000520383 144 ntBASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 AC103724.3-201ENST00000564481 992 ntBASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 AC021242.3-201ENST00000607598 1377 ntBASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RBFOX3A6NFN3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
RBFOX3A6NFN3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RBFOX3A6NFN3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.71■□□□□ 0.1
RBFOX3A6NFN3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RBFOX3A6NFN3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms