Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC196A0A1B0GTZ2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC196A0A1B0GTZ2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC196A0A1B0GTZ2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC196A0A1B0GTZ2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC196A0A1B0GTZ2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.21■■□□□ 1.31
CCDC196A0A1B0GTZ2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.21■■□□□ 1.31
CCDC196A0A1B0GTZ2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.21■■□□□ 1.31
CCDC196A0A1B0GTZ2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC196A0A1B0GTZ2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC196A0A1B0GTZ2 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.21■■□□□ 1.31
CCDC196A0A1B0GTZ2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC196A0A1B0GTZ2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC196A0A1B0GTZ2 AL691432.2-201ENST00000607222 2038 ntBASIC23.21■■□□□ 1.31
CCDC196A0A1B0GTZ2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC196A0A1B0GTZ2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CCDC196A0A1B0GTZ2 AC112907.3-201ENST00000577781 2400 ntBASIC23.21■■□□□ 1.31
CCDC196A0A1B0GTZ2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC196A0A1B0GTZ2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC196A0A1B0GTZ2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.2■■□□□ 1.3
CCDC196A0A1B0GTZ2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.2■■□□□ 1.3
CCDC196A0A1B0GTZ2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC196A0A1B0GTZ2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC196A0A1B0GTZ2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC196A0A1B0GTZ2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CCDC196A0A1B0GTZ2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.2■■□□□ 1.3
CCDC196A0A1B0GTZ2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.2■■□□□ 1.3
CCDC196A0A1B0GTZ2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.2■■□□□ 1.3
CCDC196A0A1B0GTZ2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.2■■□□□ 1.3
CCDC196A0A1B0GTZ2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC196A0A1B0GTZ2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC23.2■■□□□ 1.3
CCDC196A0A1B0GTZ2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC196A0A1B0GTZ2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC196A0A1B0GTZ2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.19■■□□□ 1.3
CCDC196A0A1B0GTZ2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC196A0A1B0GTZ2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC196A0A1B0GTZ2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.19■■□□□ 1.3
CCDC196A0A1B0GTZ2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.19■■□□□ 1.3
CCDC196A0A1B0GTZ2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.19■■□□□ 1.3
CCDC196A0A1B0GTZ2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.19■■□□□ 1.3
CCDC196A0A1B0GTZ2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CCDC196A0A1B0GTZ2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC196A0A1B0GTZ2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC196A0A1B0GTZ2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC196A0A1B0GTZ2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC196A0A1B0GTZ2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC196A0A1B0GTZ2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CCDC196A0A1B0GTZ2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.19■■□□□ 1.3
CCDC196A0A1B0GTZ2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC196A0A1B0GTZ2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.18■■□□□ 1.3
CCDC196A0A1B0GTZ2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC196A0A1B0GTZ2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC196A0A1B0GTZ2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.18■■□□□ 1.3
CCDC196A0A1B0GTZ2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.18■■□□□ 1.3
CCDC196A0A1B0GTZ2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.18■■□□□ 1.3
CCDC196A0A1B0GTZ2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC196A0A1B0GTZ2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC196A0A1B0GTZ2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.18■■□□□ 1.3
CCDC196A0A1B0GTZ2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.18■■□□□ 1.3
CCDC196A0A1B0GTZ2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.18■■□□□ 1.3
CCDC196A0A1B0GTZ2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.18■■□□□ 1.3
CCDC196A0A1B0GTZ2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.18■■□□□ 1.3
CCDC196A0A1B0GTZ2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.18■■□□□ 1.3
CCDC196A0A1B0GTZ2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC196A0A1B0GTZ2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC196A0A1B0GTZ2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.18■■□□□ 1.3
CCDC196A0A1B0GTZ2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC196A0A1B0GTZ2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.18■■□□□ 1.3
CCDC196A0A1B0GTZ2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC196A0A1B0GTZ2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC196A0A1B0GTZ2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC196A0A1B0GTZ2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC196A0A1B0GTZ2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.16■■□□□ 1.3
CCDC196A0A1B0GTZ2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC196A0A1B0GTZ2 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.16■■□□□ 1.3
CCDC196A0A1B0GTZ2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.16■■□□□ 1.3
CCDC196A0A1B0GTZ2 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.16■■□□□ 1.3
CCDC196A0A1B0GTZ2 AC006557.6-201ENST00000623071 864 ntBASIC23.16■■□□□ 1.3
CCDC196A0A1B0GTZ2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms