Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 RNA5SP413-201ENST00000516373 109 ntBASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 AC116351.2-201ENST00000606540 1585 ntBASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-4A0A0C4DH59 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-4A0A0C4DH59 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRBV5-4A0A0C4DH59 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-4A0A0C4DH59 AP001271.2-201ENST00000624018 1556 ntBASIC19.67■□□□□ 0.74
TRBV5-4A0A0C4DH59 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-4A0A0C4DH59 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-4A0A0C4DH59 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.67■□□□□ 0.74
TRBV5-4A0A0C4DH59 RPS2P52-201ENST00000469610 820 ntBASIC19.67■□□□□ 0.74
TRBV5-4A0A0C4DH59 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-4A0A0C4DH59 AC008403.3-201ENST00000598924 454 ntBASIC19.67■□□□□ 0.74
TRBV5-4A0A0C4DH59 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.67■□□□□ 0.74
TRBV5-4A0A0C4DH59 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRBV5-4A0A0C4DH59 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.67■□□□□ 0.74
TRBV5-4A0A0C4DH59 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-4A0A0C4DH59 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 AC008687.6-201ENST00000596318 630 ntBASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.66■□□□□ 0.74
TRBV5-4A0A0C4DH59 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 AC124283.5-201ENST00000624661 1809 ntBASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.65■□□□□ 0.74
TRBV5-4A0A0C4DH59 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRBV5-4A0A0C4DH59 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.74
TRBV5-4A0A0C4DH59 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV5-4A0A0C4DH59 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV5-4A0A0C4DH59 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.64■□□□□ 0.73
TRBV5-4A0A0C4DH59 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV5-4A0A0C4DH59 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.64■□□□□ 0.73
TRBV5-4A0A0C4DH59 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.64■□□□□ 0.73
TRBV5-4A0A0C4DH59 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.64■□□□□ 0.73
TRBV5-4A0A0C4DH59 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV5-4A0A0C4DH59 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV5-4A0A0C4DH59 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.64■□□□□ 0.73
TRBV5-4A0A0C4DH59 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRBV5-4A0A0C4DH59 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV5-4A0A0C4DH59 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms