Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 AC026271.2-201ENST00000428091 497 ntBASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 AL162412.1-201ENST00000567129 965 ntBASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV12-3A0A0B4J271 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 AC011767.1-201ENST00000617410 1153 ntBASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 AC120498.9-201ENST00000339021 3867 ntBASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV12-3A0A0B4J271 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms