Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AL162377.1-201ENST00000618844 1793 ntBASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 UNC93B4-201ENST00000505679 747 ntBASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 AP003097.1-201ENST00000530657 1135 ntBASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV41A0A0B4J266 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 BX119927.1-201ENST00000636596 1552 ntBASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV41A0A0B4J266 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV41A0A0B4J266 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV41A0A0B4J266 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV41A0A0B4J266 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV41A0A0B4J266 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV41A0A0B4J266 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV41A0A0B4J266 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV41A0A0B4J266 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV41A0A0B4J266 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV41A0A0B4J266 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV41A0A0B4J266 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
TRAV41A0A0B4J266 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms