Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 FAM21FP-204ENST00000608637 956 ntBASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 CCDC92B-201ENST00000575506 885 ntBASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV5A0A0B4J249 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
TRAV5A0A0B4J249 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV5A0A0B4J249 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV5A0A0B4J249 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.46■□□□□ 0.06
TRAV5A0A0B4J249 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV5A0A0B4J249 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 AC020763.4-201ENST00000623414 4170 ntBASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 AC243732.1-201ENST00000612648 864 ntBASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 LINC02228-203ENST00000641970 1355 ntBASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV5A0A0B4J249 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms