Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 AC010947.1-201ENST00000623454 693 ntBASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 Z98882.1-201ENST00000622160 2253 ntBASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 CYP2D8P-201ENST00000433633 1490 ntBASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 TERF1P1-201ENST00000311003 1181 ntBASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 AL031985.4-201ENST00000642138 673 ntBASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC187A0A096LP49 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC187A0A096LP49 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC187A0A096LP49 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC187A0A096LP49 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC187A0A096LP49 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC187A0A096LP49 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC187A0A096LP49 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC187A0A096LP49 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC187A0A096LP49 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC187A0A096LP49 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC187A0A096LP49 SLC25A3P1-201ENST00000443844 931 ntBASIC18.93■□□□□ 0.62
CCDC187A0A096LP49 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC187A0A096LP49 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC187A0A096LP49 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC187A0A096LP49 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CCDC187A0A096LP49 AL049796.1-201ENST00000565336 1766 ntBASIC18.93■□□□□ 0.62
CCDC187A0A096LP49 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC187A0A096LP49 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC187A0A096LP49 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 KRT8P17-201ENST00000453110 1448 ntBASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms