Protein–RNA interactions for Protein: Q9NP99

TREM1, Triggering receptor expressed on myeloid cells 1, humanhuman

Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1Q9NP99 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.06■□□□□ 0.96
TREM1Q9NP99 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TREM1Q9NP99 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.06■□□□□ 0.96
TREM1Q9NP99 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TREM1Q9NP99 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TREM1Q9NP99 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC21.05■□□□□ 0.96
TREM1Q9NP99 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TREM1Q9NP99 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TREM1Q9NP99 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TREM1Q9NP99 DRD5P2-201ENST00000421395 2012 ntBASIC21.04■□□□□ 0.96
TREM1Q9NP99 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TREM1Q9NP99 AL449106.1-201ENST00000608517 1980 ntBASIC21.04■□□□□ 0.96
TREM1Q9NP99 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TREM1Q9NP99 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
TREM1Q9NP99 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TREM1Q9NP99 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.02■□□□□ 0.96
TREM1Q9NP99 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TREM1Q9NP99 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.02■□□□□ 0.96
TREM1Q9NP99 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TREM1Q9NP99 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
TREM1Q9NP99 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.02■□□□□ 0.95
TREM1Q9NP99 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TREM1Q9NP99 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TREM1Q9NP99 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TREM1Q9NP99 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TREM1Q9NP99 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TREM1Q9NP99 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
TREM1Q9NP99 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TREM1Q9NP99 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TREM1Q9NP99 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TREM1Q9NP99 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TREM1Q9NP99 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TREM1Q9NP99 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.99■□□□□ 0.95
TREM1Q9NP99 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TREM1Q9NP99 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TREM1Q9NP99 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TREM1Q9NP99 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.96■□□□□ 0.95
TREM1Q9NP99 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TREM1Q9NP99 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TREM1Q9NP99 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TREM1Q9NP99 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TREM1Q9NP99 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TREM1Q9NP99 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.95■□□□□ 0.94
TREM1Q9NP99 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TREM1Q9NP99 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TREM1Q9NP99 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TREM1Q9NP99 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TREM1Q9NP99 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
TREM1Q9NP99 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TREM1Q9NP99 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.92■□□□□ 0.94
TREM1Q9NP99 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TREM1Q9NP99 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TREM1Q9NP99 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TREM1Q9NP99 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.9■□□□□ 0.94
TREM1Q9NP99 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TREM1Q9NP99 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.9■□□□□ 0.94
TREM1Q9NP99 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.9■□□□□ 0.94
TREM1Q9NP99 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
TREM1Q9NP99 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TREM1Q9NP99 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TREM1Q9NP99 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TREM1Q9NP99 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.89■□□□□ 0.93
TREM1Q9NP99 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
TREM1Q9NP99 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TREM1Q9NP99 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TREM1Q9NP99 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TREM1Q9NP99 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
TREM1Q9NP99 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TREM1Q9NP99 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.87■□□□□ 0.93
TREM1Q9NP99 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.86■□□□□ 0.93
TREM1Q9NP99 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.86■□□□□ 0.93
TREM1Q9NP99 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TREM1Q9NP99 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.86■□□□□ 0.93
TREM1Q9NP99 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TREM1Q9NP99 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TREM1Q9NP99 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TREM1Q9NP99 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TREM1Q9NP99 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.84■□□□□ 0.93
TREM1Q9NP99 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.84■□□□□ 0.93
TREM1Q9NP99 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TREM1Q9NP99 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TREM1Q9NP99 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TREM1Q9NP99 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.83■□□□□ 0.93
TREM1Q9NP99 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TREM1Q9NP99 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
TREM1Q9NP99 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.82■□□□□ 0.92
TREM1Q9NP99 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TREM1Q9NP99 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
TREM1Q9NP99 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TREM1Q9NP99 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TREM1Q9NP99 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
TREM1Q9NP99 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.81■□□□□ 0.92
TREM1Q9NP99 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TREM1Q9NP99 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TREM1Q9NP99 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TREM1Q9NP99 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.8■□□□□ 0.92
TREM1Q9NP99 AL139393.2-201ENST00000608721 2025 ntBASIC20.8■□□□□ 0.92
TREM1Q9NP99 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TREM1Q9NP99 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TREM1Q9NP99 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms