Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.32■■□□□ 1.8
LRRC40Q9H9A6 AC127502.1-201ENST00000399971 1502 ntBASIC26.32■■□□□ 1.8
LRRC40Q9H9A6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LRRC40Q9H9A6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.31■■□□□ 1.8
LRRC40Q9H9A6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.31■■□□□ 1.8
LRRC40Q9H9A6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LRRC40Q9H9A6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
LRRC40Q9H9A6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LRRC40Q9H9A6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.29■■□□□ 1.8
LRRC40Q9H9A6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
LRRC40Q9H9A6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
LRRC40Q9H9A6 AP004833.2-201ENST00000532228 1454 ntBASIC26.28■■□□□ 1.8
LRRC40Q9H9A6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
LRRC40Q9H9A6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
LRRC40Q9H9A6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
LRRC40Q9H9A6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
LRRC40Q9H9A6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.27■■□□□ 1.8
LRRC40Q9H9A6 DUX4L28-201ENST00000623687 678 ntBASIC26.27■■□□□ 1.8
LRRC40Q9H9A6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
LRRC40Q9H9A6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LRRC40Q9H9A6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.26■■□□□ 1.79
LRRC40Q9H9A6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.25■■□□□ 1.79
LRRC40Q9H9A6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.25■■□□□ 1.79
LRRC40Q9H9A6 AC142086.6-201ENST00000621154 1765 ntBASIC26.25■■□□□ 1.79
LRRC40Q9H9A6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.24■■□□□ 1.79
LRRC40Q9H9A6 MIR3665-201ENST00000578708 105 ntBASIC26.24■■□□□ 1.79
LRRC40Q9H9A6 AP006261.1-201ENST00000584783 668 ntBASIC26.24■■□□□ 1.79
LRRC40Q9H9A6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.24■■□□□ 1.79
LRRC40Q9H9A6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
LRRC40Q9H9A6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.23■■□□□ 1.79
LRRC40Q9H9A6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.23■■□□□ 1.79
LRRC40Q9H9A6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.23■■□□□ 1.79
LRRC40Q9H9A6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.23■■□□□ 1.79
LRRC40Q9H9A6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.23■■□□□ 1.79
LRRC40Q9H9A6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
LRRC40Q9H9A6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
LRRC40Q9H9A6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LRRC40Q9H9A6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
LRRC40Q9H9A6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
LRRC40Q9H9A6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.21■■□□□ 1.79
LRRC40Q9H9A6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
LRRC40Q9H9A6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
LRRC40Q9H9A6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
LRRC40Q9H9A6 AC108673.1-201ENST00000510422 1159 ntBASIC26.2■■□□□ 1.78
LRRC40Q9H9A6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
LRRC40Q9H9A6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
LRRC40Q9H9A6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.19■■□□□ 1.78
LRRC40Q9H9A6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
LRRC40Q9H9A6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
LRRC40Q9H9A6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
LRRC40Q9H9A6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
LRRC40Q9H9A6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.19■■□□□ 1.78
LRRC40Q9H9A6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.18■■□□□ 1.78
LRRC40Q9H9A6 DRD5P2-201ENST00000421395 2012 ntBASIC26.18■■□□□ 1.78
LRRC40Q9H9A6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
LRRC40Q9H9A6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
LRRC40Q9H9A6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
LRRC40Q9H9A6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LRRC40Q9H9A6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LRRC40Q9H9A6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
LRRC40Q9H9A6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LRRC40Q9H9A6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.15■■□□□ 1.78
LRRC40Q9H9A6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.14■■□□□ 1.78
LRRC40Q9H9A6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
LRRC40Q9H9A6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.14■■□□□ 1.77
LRRC40Q9H9A6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
LRRC40Q9H9A6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LRRC40Q9H9A6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LRRC40Q9H9A6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.12■■□□□ 1.77
LRRC40Q9H9A6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
LRRC40Q9H9A6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
LRRC40Q9H9A6 MIR6090-201ENST00000622481 60 ntBASIC26.12■■□□□ 1.77
LRRC40Q9H9A6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
LRRC40Q9H9A6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
LRRC40Q9H9A6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
LRRC40Q9H9A6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
LRRC40Q9H9A6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.11■■□□□ 1.77
LRRC40Q9H9A6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.11■■□□□ 1.77
LRRC40Q9H9A6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
LRRC40Q9H9A6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
LRRC40Q9H9A6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.1■■□□□ 1.77
LRRC40Q9H9A6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
LRRC40Q9H9A6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
LRRC40Q9H9A6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
LRRC40Q9H9A6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LRRC40Q9H9A6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.77
LRRC40Q9H9A6 AL162393.1-201ENST00000437852 946 ntBASIC26.08■■□□□ 1.77
LRRC40Q9H9A6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
LRRC40Q9H9A6 AC087741.3-201ENST00000624270 1347 ntBASIC26.07■■□□□ 1.76
LRRC40Q9H9A6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.06■■□□□ 1.76
LRRC40Q9H9A6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.06■■□□□ 1.76
LRRC40Q9H9A6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
LRRC40Q9H9A6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LRRC40Q9H9A6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
LRRC40Q9H9A6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LRRC40Q9H9A6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
LRRC40Q9H9A6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LRRC40Q9H9A6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
LRRC40Q9H9A6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
LRRC40Q9H9A6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms