Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NKX6-2Q9C056 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NKX6-2Q9C056 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21■□□□□ 0.95
NKX6-2Q9C056 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NKX6-2Q9C056 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NKX6-2Q9C056 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NKX6-2Q9C056 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NKX6-2Q9C056 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.99■□□□□ 0.95
NKX6-2Q9C056 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NKX6-2Q9C056 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
NKX6-2Q9C056 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NKX6-2Q9C056 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NKX6-2Q9C056 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NKX6-2Q9C056 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NKX6-2Q9C056 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
NKX6-2Q9C056 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NKX6-2Q9C056 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NKX6-2Q9C056 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NKX6-2Q9C056 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.97■□□□□ 0.95
NKX6-2Q9C056 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NKX6-2Q9C056 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NKX6-2Q9C056 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NKX6-2Q9C056 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NKX6-2Q9C056 AC093323.1-202ENST00000635031 2045 ntBASIC20.94■□□□□ 0.94
NKX6-2Q9C056 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.94■□□□□ 0.94
NKX6-2Q9C056 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.93■□□□□ 0.94
NKX6-2Q9C056 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.93■□□□□ 0.94
NKX6-2Q9C056 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NKX6-2Q9C056 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NKX6-2Q9C056 DRD5P2-201ENST00000421395 2012 ntBASIC20.92■□□□□ 0.94
NKX6-2Q9C056 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NKX6-2Q9C056 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.91■□□□□ 0.94
NKX6-2Q9C056 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.91■□□□□ 0.94
NKX6-2Q9C056 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NKX6-2Q9C056 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX6-2Q9C056 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX6-2Q9C056 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.87■□□□□ 0.93
NKX6-2Q9C056 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX6-2Q9C056 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX6-2Q9C056 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.87■□□□□ 0.93
NKX6-2Q9C056 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX6-2Q9C056 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX6-2Q9C056 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX6-2Q9C056 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.86■□□□□ 0.93
NKX6-2Q9C056 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NKX6-2Q9C056 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NKX6-2Q9C056 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
NKX6-2Q9C056 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NKX6-2Q9C056 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.84■□□□□ 0.93
NKX6-2Q9C056 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX6-2Q9C056 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX6-2Q9C056 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX6-2Q9C056 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
NKX6-2Q9C056 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NKX6-2Q9C056 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NKX6-2Q9C056 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.81■□□□□ 0.92
NKX6-2Q9C056 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NKX6-2Q9C056 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NKX6-2Q9C056 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NKX6-2Q9C056 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NKX6-2Q9C056 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NKX6-2Q9C056 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NKX6-2Q9C056 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NKX6-2Q9C056 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NKX6-2Q9C056 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NKX6-2Q9C056 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NKX6-2Q9C056 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.78■□□□□ 0.92
NKX6-2Q9C056 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKX6-2Q9C056 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.78■□□□□ 0.92
NKX6-2Q9C056 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKX6-2Q9C056 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKX6-2Q9C056 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKX6-2Q9C056 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKX6-2Q9C056 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.77■□□□□ 0.92
NKX6-2Q9C056 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.76■□□□□ 0.91
NKX6-2Q9C056 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NKX6-2Q9C056 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NKX6-2Q9C056 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NKX6-2Q9C056 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKX6-2Q9C056 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKX6-2Q9C056 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKX6-2Q9C056 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NKX6-2Q9C056 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NKX6-2Q9C056 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKX6-2Q9C056 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKX6-2Q9C056 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKX6-2Q9C056 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
NKX6-2Q9C056 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKX6-2Q9C056 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKX6-2Q9C056 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX6-2Q9C056 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX6-2Q9C056 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX6-2Q9C056 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX6-2Q9C056 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.73■□□□□ 0.91
NKX6-2Q9C056 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX6-2Q9C056 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NKX6-2Q9C056 AC020928.2-201ENST00000588717 2197 ntBASIC20.72■□□□□ 0.91
NKX6-2Q9C056 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.72■□□□□ 0.91
NKX6-2Q9C056 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.72■□□□□ 0.91
NKX6-2Q9C056 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms