Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.71■■■□□ 2.03
SLC4A11Q8NBS3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
SLC4A11Q8NBS3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
SLC4A11Q8NBS3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
SLC4A11Q8NBS3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SLC4A11Q8NBS3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SLC4A11Q8NBS3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.68■■■□□ 2.02
SLC4A11Q8NBS3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
SLC4A11Q8NBS3 ABCB10P3-201ENST00000561950 2166 ntBASIC27.67■■■□□ 2.02
SLC4A11Q8NBS3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.67■■■□□ 2.02
SLC4A11Q8NBS3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SLC4A11Q8NBS3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
SLC4A11Q8NBS3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
SLC4A11Q8NBS3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SLC4A11Q8NBS3 AC021231.2-201ENST00000594613 730 ntBASIC27.64■■■□□ 2.02
SLC4A11Q8NBS3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
SLC4A11Q8NBS3 AL139393.2-201ENST00000608721 2025 ntBASIC27.63■■■□□ 2.01
SLC4A11Q8NBS3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
SLC4A11Q8NBS3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
SLC4A11Q8NBS3 DUX4L29-201ENST00000425409 679 ntBASIC27.62■■■□□ 2.01
SLC4A11Q8NBS3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SLC4A11Q8NBS3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
SLC4A11Q8NBS3 AC139426.1-201ENST00000568218 2529 ntBASIC27.61■■■□□ 2.01
SLC4A11Q8NBS3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SLC4A11Q8NBS3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.61■■■□□ 2.01
SLC4A11Q8NBS3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.6■■■□□ 2.01
SLC4A11Q8NBS3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
SLC4A11Q8NBS3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.6■■■□□ 2.01
SLC4A11Q8NBS3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
SLC4A11Q8NBS3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
SLC4A11Q8NBS3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.59■■■□□ 2.01
SLC4A11Q8NBS3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
SLC4A11Q8NBS3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.59■■■□□ 2.01
SLC4A11Q8NBS3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
SLC4A11Q8NBS3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SLC4A11Q8NBS3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.58■■■□□ 2.01
SLC4A11Q8NBS3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2.01
SLC4A11Q8NBS3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SLC4A11Q8NBS3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2.01
SLC4A11Q8NBS3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SLC4A11Q8NBS3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.58■■■□□ 2.01
SLC4A11Q8NBS3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.58■■■□□ 2.01
SLC4A11Q8NBS3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2
SLC4A11Q8NBS3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SLC4A11Q8NBS3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.57■■■□□ 2
SLC4A11Q8NBS3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
SLC4A11Q8NBS3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.56■■■□□ 2
SLC4A11Q8NBS3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.56■■■□□ 2
SLC4A11Q8NBS3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SLC4A11Q8NBS3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.55■■■□□ 2
SLC4A11Q8NBS3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.55■■■□□ 2
SLC4A11Q8NBS3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SLC4A11Q8NBS3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SLC4A11Q8NBS3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SLC4A11Q8NBS3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
SLC4A11Q8NBS3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SLC4A11Q8NBS3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.54■■■□□ 2
SLC4A11Q8NBS3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
SLC4A11Q8NBS3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.54■■■□□ 2
SLC4A11Q8NBS3 LINC00273-201ENST00000539813 1452 ntBASIC27.54■■■□□ 2
SLC4A11Q8NBS3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.53■■■□□ 2
SLC4A11Q8NBS3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SLC4A11Q8NBS3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SLC4A11Q8NBS3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SLC4A11Q8NBS3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.53■■■□□ 2
SLC4A11Q8NBS3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.53■■■□□ 2
SLC4A11Q8NBS3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.52■■■□□ 2
SLC4A11Q8NBS3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.52■■■□□ 2
SLC4A11Q8NBS3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
SLC4A11Q8NBS3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.51■■□□□ 1.99
SLC4A11Q8NBS3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.51■■□□□ 1.99
SLC4A11Q8NBS3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
SLC4A11Q8NBS3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.5■■□□□ 1.99
SLC4A11Q8NBS3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SLC4A11Q8NBS3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SLC4A11Q8NBS3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SLC4A11Q8NBS3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.49■■□□□ 1.99
SLC4A11Q8NBS3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SLC4A11Q8NBS3 AP004833.2-201ENST00000532228 1454 ntBASIC27.49■■□□□ 1.99
SLC4A11Q8NBS3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
SLC4A11Q8NBS3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.49■■□□□ 1.99
SLC4A11Q8NBS3 AC135983.2-203ENST00000454486 1613 ntBASIC27.49■■□□□ 1.99
SLC4A11Q8NBS3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SLC4A11Q8NBS3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.48■■□□□ 1.99
SLC4A11Q8NBS3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
SLC4A11Q8NBS3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SLC4A11Q8NBS3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
SLC4A11Q8NBS3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.46■■□□□ 1.99
SLC4A11Q8NBS3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.46■■□□□ 1.99
SLC4A11Q8NBS3 ABHD17AP4-201ENST00000411545 909 ntBASIC27.46■■□□□ 1.99
SLC4A11Q8NBS3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
SLC4A11Q8NBS3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
SLC4A11Q8NBS3 WHAMMP2-203ENST00000563942 1603 ntBASIC27.45■■□□□ 1.99
SLC4A11Q8NBS3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.98
SLC4A11Q8NBS3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SLC4A11Q8NBS3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.45■■□□□ 1.98
SLC4A11Q8NBS3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.44■■□□□ 1.98
SLC4A11Q8NBS3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.44■■□□□ 1.98
SLC4A11Q8NBS3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SLC4A11Q8NBS3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms