Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RFX6Q8HWS3 AC127502.1-201ENST00000399971 1502 ntBASIC26.9■■□□□ 1.9
RFX6Q8HWS3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
RFX6Q8HWS3 AC005559.1-201ENST00000589661 871 ntBASIC26.89■■□□□ 1.9
RFX6Q8HWS3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RFX6Q8HWS3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RFX6Q8HWS3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RFX6Q8HWS3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
RFX6Q8HWS3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RFX6Q8HWS3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RFX6Q8HWS3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RFX6Q8HWS3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.86■■□□□ 1.89
RFX6Q8HWS3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RFX6Q8HWS3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RFX6Q8HWS3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RFX6Q8HWS3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
RFX6Q8HWS3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RFX6Q8HWS3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.85■■□□□ 1.89
RFX6Q8HWS3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.84■■□□□ 1.89
RFX6Q8HWS3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RFX6Q8HWS3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.84■■□□□ 1.89
RFX6Q8HWS3 AC142086.6-201ENST00000621154 1765 ntBASIC26.84■■□□□ 1.89
RFX6Q8HWS3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
RFX6Q8HWS3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RFX6Q8HWS3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RFX6Q8HWS3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RFX6Q8HWS3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.83■■□□□ 1.88
RFX6Q8HWS3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
RFX6Q8HWS3 DRD5P2-201ENST00000421395 2012 ntBASIC26.82■■□□□ 1.88
RFX6Q8HWS3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
RFX6Q8HWS3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RFX6Q8HWS3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
RFX6Q8HWS3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.82■■□□□ 1.88
RFX6Q8HWS3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.81■■□□□ 1.88
RFX6Q8HWS3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
RFX6Q8HWS3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.8■■□□□ 1.88
RFX6Q8HWS3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.8■■□□□ 1.88
RFX6Q8HWS3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
RFX6Q8HWS3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
RFX6Q8HWS3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RFX6Q8HWS3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RFX6Q8HWS3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.79■■□□□ 1.88
RFX6Q8HWS3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
RFX6Q8HWS3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RFX6Q8HWS3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
RFX6Q8HWS3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.78■■□□□ 1.88
RFX6Q8HWS3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
RFX6Q8HWS3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.78■■□□□ 1.88
RFX6Q8HWS3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.78■■□□□ 1.88
RFX6Q8HWS3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
RFX6Q8HWS3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
RFX6Q8HWS3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
RFX6Q8HWS3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
RFX6Q8HWS3 AP004833.2-201ENST00000532228 1454 ntBASIC26.76■■□□□ 1.87
RFX6Q8HWS3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
RFX6Q8HWS3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RFX6Q8HWS3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.76■■□□□ 1.87
RFX6Q8HWS3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RFX6Q8HWS3 DUX4L28-201ENST00000623687 678 ntBASIC26.75■■□□□ 1.87
RFX6Q8HWS3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.74■■□□□ 1.87
RFX6Q8HWS3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
RFX6Q8HWS3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.73■■□□□ 1.87
RFX6Q8HWS3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
RFX6Q8HWS3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.73■■□□□ 1.87
RFX6Q8HWS3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RFX6Q8HWS3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RFX6Q8HWS3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.72■■□□□ 1.87
RFX6Q8HWS3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.72■■□□□ 1.87
RFX6Q8HWS3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.72■■□□□ 1.87
RFX6Q8HWS3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RFX6Q8HWS3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
RFX6Q8HWS3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RFX6Q8HWS3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RFX6Q8HWS3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.71■■□□□ 1.87
RFX6Q8HWS3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
RFX6Q8HWS3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.87
RFX6Q8HWS3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
RFX6Q8HWS3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RFX6Q8HWS3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
RFX6Q8HWS3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RFX6Q8HWS3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.7■■□□□ 1.86
RFX6Q8HWS3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RFX6Q8HWS3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RFX6Q8HWS3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RFX6Q8HWS3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RFX6Q8HWS3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.69■■□□□ 1.86
RFX6Q8HWS3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RFX6Q8HWS3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RFX6Q8HWS3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RFX6Q8HWS3 MIR3665-201ENST00000578708 105 ntBASIC26.68■■□□□ 1.86
RFX6Q8HWS3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.68■■□□□ 1.86
RFX6Q8HWS3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
RFX6Q8HWS3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RFX6Q8HWS3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.67■■□□□ 1.86
RFX6Q8HWS3 AC108673.1-201ENST00000510422 1159 ntBASIC26.67■■□□□ 1.86
RFX6Q8HWS3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.66■■□□□ 1.86
RFX6Q8HWS3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RFX6Q8HWS3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RFX6Q8HWS3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RFX6Q8HWS3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms