Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
LRRK2Q5S007 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LRRK2Q5S007 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
LRRK2Q5S007 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LRRK2Q5S007 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.31■■□□□ 1.32
LRRK2Q5S007 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.31■■□□□ 1.32
LRRK2Q5S007 AL451085.2-201ENST00000605085 799 ntBASIC23.31■■□□□ 1.32
LRRK2Q5S007 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
LRRK2Q5S007 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.3■■□□□ 1.32
LRRK2Q5S007 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.3■■□□□ 1.32
LRRK2Q5S007 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LRRK2Q5S007 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRRK2Q5S007 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRRK2Q5S007 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LRRK2Q5S007 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LRRK2Q5S007 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LRRK2Q5S007 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LRRK2Q5S007 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.27■■□□□ 1.32
LRRK2Q5S007 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LRRK2Q5S007 AC004987.1-201ENST00000428627 508 ntBASIC23.27■■□□□ 1.32
LRRK2Q5S007 ATP5G2P3-201ENST00000429083 425 ntBASIC23.27■■□□□ 1.32
LRRK2Q5S007 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
LRRK2Q5S007 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LRRK2Q5S007 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LRRK2Q5S007 U85056.1-201ENST00000616429 682 ntBASIC23.25■■□□□ 1.31
LRRK2Q5S007 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.24■■□□□ 1.31
LRRK2Q5S007 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LRRK2Q5S007 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LRRK2Q5S007 MIR935-201ENST00000401179 91 ntBASIC23.23■■□□□ 1.31
LRRK2Q5S007 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LRRK2Q5S007 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
LRRK2Q5S007 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.23■■□□□ 1.31
LRRK2Q5S007 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.22■■□□□ 1.31
LRRK2Q5S007 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LRRK2Q5S007 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.22■■□□□ 1.31
LRRK2Q5S007 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
LRRK2Q5S007 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LRRK2Q5S007 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
LRRK2Q5S007 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.2■■□□□ 1.3
LRRK2Q5S007 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LRRK2Q5S007 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.19■■□□□ 1.3
LRRK2Q5S007 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRK2Q5S007 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRK2Q5S007 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRK2Q5S007 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LRRK2Q5S007 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LRRK2Q5S007 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
LRRK2Q5S007 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.18■■□□□ 1.3
LRRK2Q5S007 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.17■■□□□ 1.3
LRRK2Q5S007 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRRK2Q5S007 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.16■■□□□ 1.3
LRRK2Q5S007 AC060814.1-201ENST00000554326 538 ntBASIC23.16■■□□□ 1.3
LRRK2Q5S007 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LRRK2Q5S007 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRRK2Q5S007 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.15■■□□□ 1.3
LRRK2Q5S007 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LRRK2Q5S007 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRRK2Q5S007 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRRK2Q5S007 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRRK2Q5S007 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LRRK2Q5S007 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LRRK2Q5S007 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.11■■□□□ 1.29
LRRK2Q5S007 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.11■■□□□ 1.29
LRRK2Q5S007 AC131212.1-201ENST00000613771 668 ntBASIC23.11■■□□□ 1.29
LRRK2Q5S007 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.1■■□□□ 1.29
LRRK2Q5S007 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.1■■□□□ 1.29
LRRK2Q5S007 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LRRK2Q5S007 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
LRRK2Q5S007 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.09■■□□□ 1.29
LRRK2Q5S007 AC092296.2-201ENST00000589470 999 ntBASIC23.09■■□□□ 1.29
LRRK2Q5S007 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.08■■□□□ 1.29
LRRK2Q5S007 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.08■■□□□ 1.29
LRRK2Q5S007 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LRRK2Q5S007 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.07■■□□□ 1.28
LRRK2Q5S007 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LRRK2Q5S007 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LRRK2Q5S007 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LRRK2Q5S007 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.06■■□□□ 1.28
LRRK2Q5S007 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.06■■□□□ 1.28
LRRK2Q5S007 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LRRK2Q5S007 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.05■■□□□ 1.28
LRRK2Q5S007 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LRRK2Q5S007 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LRRK2Q5S007 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.04■■□□□ 1.28
LRRK2Q5S007 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LRRK2Q5S007 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.04■■□□□ 1.28
LRRK2Q5S007 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
LRRK2Q5S007 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
LRRK2Q5S007 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
LRRK2Q5S007 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LRRK2Q5S007 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.03■■□□□ 1.28
LRRK2Q5S007 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRRK2Q5S007 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.02■■□□□ 1.28
LRRK2Q5S007 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRRK2Q5S007 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.02■■□□□ 1.27
LRRK2Q5S007 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.01■■□□□ 1.27
LRRK2Q5S007 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23■■□□□ 1.27
LRRK2Q5S007 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LRRK2Q5S007 LINC00273-201ENST00000539813 1452 ntBASIC22.99■■□□□ 1.27
LRRK2Q5S007 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms