Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
FREM1Q5H8C1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
FREM1Q5H8C1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.01■■□□□ 1.27
FREM1Q5H8C1 LINC00273-201ENST00000539813 1452 ntBASIC23.01■■□□□ 1.27
FREM1Q5H8C1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23■■□□□ 1.27
FREM1Q5H8C1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23■■□□□ 1.27
FREM1Q5H8C1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FREM1Q5H8C1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23■■□□□ 1.27
FREM1Q5H8C1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
FREM1Q5H8C1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
FREM1Q5H8C1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
FREM1Q5H8C1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC22.99■■□□□ 1.27
FREM1Q5H8C1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
FREM1Q5H8C1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.99■■□□□ 1.27
FREM1Q5H8C1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
FREM1Q5H8C1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.98■■□□□ 1.27
FREM1Q5H8C1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
FREM1Q5H8C1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
FREM1Q5H8C1 ZNRF2P2-203ENST00000454624 420 ntBASIC22.97■■□□□ 1.27
FREM1Q5H8C1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FREM1Q5H8C1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
FREM1Q5H8C1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FREM1Q5H8C1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FREM1Q5H8C1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
FREM1Q5H8C1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
FREM1Q5H8C1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
FREM1Q5H8C1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.95■■□□□ 1.26
FREM1Q5H8C1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
FREM1Q5H8C1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
FREM1Q5H8C1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
FREM1Q5H8C1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.93■■□□□ 1.26
FREM1Q5H8C1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
FREM1Q5H8C1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
FREM1Q5H8C1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.91■■□□□ 1.26
FREM1Q5H8C1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
FREM1Q5H8C1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
FREM1Q5H8C1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
FREM1Q5H8C1 AC135983.2-203ENST00000454486 1613 ntBASIC22.91■■□□□ 1.26
FREM1Q5H8C1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
FREM1Q5H8C1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
FREM1Q5H8C1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
FREM1Q5H8C1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.9■■□□□ 1.26
FREM1Q5H8C1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.9■■□□□ 1.26
FREM1Q5H8C1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.9■■□□□ 1.26
FREM1Q5H8C1 CR559946.2-201ENST00000623684 991 ntBASIC22.9■■□□□ 1.26
FREM1Q5H8C1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
FREM1Q5H8C1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
FREM1Q5H8C1 MIR3648-2-201ENST00000581792 180 ntBASIC22.89■■□□□ 1.25
FREM1Q5H8C1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.89■■□□□ 1.25
FREM1Q5H8C1 MIR3648-1-201ENST00000615959 180 ntBASIC22.89■■□□□ 1.25
FREM1Q5H8C1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.88■■□□□ 1.25
FREM1Q5H8C1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
FREM1Q5H8C1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
FREM1Q5H8C1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
FREM1Q5H8C1 AC127502.1-201ENST00000399971 1502 ntBASIC22.88■■□□□ 1.25
FREM1Q5H8C1 LINC01971-201ENST00000617888 1048 ntBASIC22.87■■□□□ 1.25
FREM1Q5H8C1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
FREM1Q5H8C1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.87■■□□□ 1.25
FREM1Q5H8C1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.87■■□□□ 1.25
FREM1Q5H8C1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
FREM1Q5H8C1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.86■■□□□ 1.25
FREM1Q5H8C1 AC139426.1-201ENST00000568218 2529 ntBASIC22.86■■□□□ 1.25
FREM1Q5H8C1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
FREM1Q5H8C1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
FREM1Q5H8C1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
FREM1Q5H8C1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.85■■□□□ 1.25
FREM1Q5H8C1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
FREM1Q5H8C1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.85■■□□□ 1.25
FREM1Q5H8C1 WHAMMP2-203ENST00000563942 1603 ntBASIC22.84■■□□□ 1.25
FREM1Q5H8C1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
FREM1Q5H8C1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.84■■□□□ 1.25
FREM1Q5H8C1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
FREM1Q5H8C1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
FREM1Q5H8C1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
FREM1Q5H8C1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.83■■□□□ 1.24
FREM1Q5H8C1 AC016575.1-201ENST00000607026 382 ntBASIC22.82■■□□□ 1.24
FREM1Q5H8C1 DUX4L11-201ENST00000611504 1267 ntBASIC22.82■■□□□ 1.24
FREM1Q5H8C1 DUX4L12-201ENST00000614593 1267 ntBASIC22.82■■□□□ 1.24
FREM1Q5H8C1 DUX4L14-201ENST00000621227 1267 ntBASIC22.82■■□□□ 1.24
FREM1Q5H8C1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
FREM1Q5H8C1 DUX4L13-201ENST00000554103 1267 ntBASIC22.82■■□□□ 1.24
FREM1Q5H8C1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
FREM1Q5H8C1 DUX4L15-201ENST00000611059 1267 ntBASIC22.82■■□□□ 1.24
FREM1Q5H8C1 DUX4L23-201ENST00000615195 1269 ntBASIC22.82■■□□□ 1.24
FREM1Q5H8C1 DUX4L24-201ENST00000617576 1269 ntBASIC22.82■■□□□ 1.24
FREM1Q5H8C1 DUX4L22-201ENST00000618238 1269 ntBASIC22.82■■□□□ 1.24
FREM1Q5H8C1 DUX4L20-201ENST00000619712 1269 ntBASIC22.82■■□□□ 1.24
FREM1Q5H8C1 DUX4L21-201ENST00000622058 1269 ntBASIC22.82■■□□□ 1.24
FREM1Q5H8C1 DUX4L10-201ENST00000622460 1267 ntBASIC22.82■■□□□ 1.24
FREM1Q5H8C1 DUX4L25-201ENST00000624915 1269 ntBASIC22.82■■□□□ 1.24
FREM1Q5H8C1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
FREM1Q5H8C1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
FREM1Q5H8C1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
FREM1Q5H8C1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
FREM1Q5H8C1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.8■■□□□ 1.24
FREM1Q5H8C1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.8■■□□□ 1.24
FREM1Q5H8C1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
FREM1Q5H8C1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.79■■□□□ 1.24
FREM1Q5H8C1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
FREM1Q5H8C1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms