Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
ATP2B3Q16720 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.71
ATP2B3Q16720 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.01■■■□□ 2.71
ATP2B3Q16720 AC127502.1-201ENST00000399971 1502 ntBASIC32■■■□□ 2.71
ATP2B3Q16720 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
ATP2B3Q16720 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC32■■■□□ 2.71
ATP2B3Q16720 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC32■■■□□ 2.71
ATP2B3Q16720 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.99■■■□□ 2.71
ATP2B3Q16720 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
ATP2B3Q16720 LINC00273-201ENST00000539813 1452 ntBASIC31.98■■■□□ 2.71
ATP2B3Q16720 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.98■■■□□ 2.71
ATP2B3Q16720 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.98■■■□□ 2.71
ATP2B3Q16720 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
ATP2B3Q16720 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.98■■■□□ 2.71
ATP2B3Q16720 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.97■■■□□ 2.71
ATP2B3Q16720 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
ATP2B3Q16720 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.97■■■□□ 2.71
ATP2B3Q16720 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
ATP2B3Q16720 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
ATP2B3Q16720 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
ATP2B3Q16720 MIR3648-2-201ENST00000581792 180 ntBASIC31.95■■■□□ 2.71
ATP2B3Q16720 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.95■■■□□ 2.71
ATP2B3Q16720 MIR3648-1-201ENST00000615959 180 ntBASIC31.95■■■□□ 2.71
ATP2B3Q16720 CR559946.2-201ENST00000623684 991 ntBASIC31.95■■■□□ 2.71
ATP2B3Q16720 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.95■■■□□ 2.71
ATP2B3Q16720 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.94■■■□□ 2.7
ATP2B3Q16720 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
ATP2B3Q16720 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
ATP2B3Q16720 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
ATP2B3Q16720 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
ATP2B3Q16720 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.92■■■□□ 2.7
ATP2B3Q16720 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.92■■■□□ 2.7
ATP2B3Q16720 AC016575.1-201ENST00000607026 382 ntBASIC31.92■■■□□ 2.7
ATP2B3Q16720 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
ATP2B3Q16720 ST7-AS1-201ENST00000456775 1889 ntBASIC31.91■■■□□ 2.7
ATP2B3Q16720 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ATP2B3Q16720 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.91■■■□□ 2.7
ATP2B3Q16720 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
ATP2B3Q16720 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.9■■■□□ 2.7
ATP2B3Q16720 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
ATP2B3Q16720 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.89■■■□□ 2.7
ATP2B3Q16720 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.89■■■□□ 2.7
ATP2B3Q16720 DUX4L13-201ENST00000554103 1267 ntBASIC31.89■■■□□ 2.7
ATP2B3Q16720 DUX4L15-201ENST00000611059 1267 ntBASIC31.89■■■□□ 2.7
ATP2B3Q16720 DUX4L23-201ENST00000615195 1269 ntBASIC31.89■■■□□ 2.7
ATP2B3Q16720 DUX4L24-201ENST00000617576 1269 ntBASIC31.89■■■□□ 2.7
ATP2B3Q16720 DUX4L22-201ENST00000618238 1269 ntBASIC31.89■■■□□ 2.7
ATP2B3Q16720 DUX4L20-201ENST00000619712 1269 ntBASIC31.89■■■□□ 2.7
ATP2B3Q16720 DUX4L21-201ENST00000622058 1269 ntBASIC31.89■■■□□ 2.7
ATP2B3Q16720 DUX4L10-201ENST00000622460 1267 ntBASIC31.89■■■□□ 2.7
ATP2B3Q16720 DUX4L25-201ENST00000624915 1269 ntBASIC31.89■■■□□ 2.7
ATP2B3Q16720 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
ATP2B3Q16720 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
ATP2B3Q16720 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
ATP2B3Q16720 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
ATP2B3Q16720 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
ATP2B3Q16720 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.87■■■□□ 2.69
ATP2B3Q16720 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.87■■■□□ 2.69
ATP2B3Q16720 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
ATP2B3Q16720 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
ATP2B3Q16720 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
ATP2B3Q16720 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.86■■■□□ 2.69
ATP2B3Q16720 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ATP2B3Q16720 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.85■■■□□ 2.69
ATP2B3Q16720 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ATP2B3Q16720 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
ATP2B3Q16720 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
ATP2B3Q16720 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
ATP2B3Q16720 MIR639-201ENST00000384974 98 ntBASIC31.84■■■□□ 2.69
ATP2B3Q16720 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
ATP2B3Q16720 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
ATP2B3Q16720 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.83■■■□□ 2.69
ATP2B3Q16720 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.82■■■□□ 2.68
ATP2B3Q16720 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.82■■■□□ 2.68
ATP2B3Q16720 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
ATP2B3Q16720 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ATP2B3Q16720 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
ATP2B3Q16720 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ATP2B3Q16720 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
ATP2B3Q16720 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
ATP2B3Q16720 AC135983.2-203ENST00000454486 1613 ntBASIC31.78■■■□□ 2.68
ATP2B3Q16720 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
ATP2B3Q16720 WHAMMP2-203ENST00000563942 1603 ntBASIC31.77■■■□□ 2.68
ATP2B3Q16720 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
ATP2B3Q16720 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
ATP2B3Q16720 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ATP2B3Q16720 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
ATP2B3Q16720 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ATP2B3Q16720 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
ATP2B3Q16720 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.74■■■□□ 2.67
ATP2B3Q16720 MIR4449-201ENST00000578365 66 ntBASIC31.74■■■□□ 2.67
ATP2B3Q16720 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
ATP2B3Q16720 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.74■■■□□ 2.67
ATP2B3Q16720 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ATP2B3Q16720 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ATP2B3Q16720 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
ATP2B3Q16720 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
ATP2B3Q16720 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ATP2B3Q16720 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
ATP2B3Q16720 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.69■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms