Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 ENT4YLL038C 744 nt13.19□□□□□ -0.3
RKR1Q04781 YJR149WYJR149W 1215 nt13.18□□□□□ -0.3
RKR1Q04781 ITR2YOL103W 1830 nt13.18□□□□□ -0.3
RKR1Q04781 SRP54YPR088C 1626 nt13.16□□□□□ -0.3
RKR1Q04781 YMR166CYMR166C 1107 nt13.15□□□□□ -0.3
RKR1Q04781 SUV3YPL029W 2214 nt13.14□□□□□ -0.31
RKR1Q04781 KEL3YPL263C 1956 nt13.12□□□□□ -0.31
RKR1Q04781 COS10YNR075W 1125 nt13.1□□□□□ -0.31
RKR1Q04781 GDH1YOR375C 1365 nt13.09□□□□□ -0.31
RKR1Q04781 CRC1YOR100C 984 nt13.08□□□□□ -0.32
RKR1Q04781 HAP5YOR358W 729 nt13.08□□□□□ -0.32
RKR1Q04781 DLD3YEL071W 1491 nt13.08□□□□□ -0.32
RKR1Q04781 RDN25-1RDN25-1 3396 nt13.07□□□□□ -0.32
RKR1Q04781 RDN25-2RDN25-2 3396 nt13.07□□□□□ -0.32
RKR1Q04781 ADE1YAR015W 921 nt13.07□□□□□ -0.32
RKR1Q04781 LSR1LSR1 1175 nt13.06□□□□□ -0.32
RKR1Q04781 SPG1YGR236C 288 nt13.05□□□□□ -0.32
RKR1Q04781 RPC82YPR190C 1965 nt13.05□□□□□ -0.32
RKR1Q04781 YMR265CYMR265C 1386 nt13.05□□□□□ -0.32
RKR1Q04781 VMA11YPL234C 495 nt13.03□□□□□ -0.32
RKR1Q04781 INA1YLR413W 2028 nt13.03□□□□□ -0.32
RKR1Q04781 SAN1YDR143C 1833 nt13.01□□□□□ -0.33
RKR1Q04781 ILV3YJR016C 1758 nt13□□□□□ -0.33
RKR1Q04781 PET494YNR045W 1470 nt12.99□□□□□ -0.33
RKR1Q04781 FUS3YBL016W 1062 nt12.98□□□□□ -0.33
RKR1Q04781 RIM2YBR192W 1134 nt12.98□□□□□ -0.33
RKR1Q04781 MFT1YML062C 1179 nt12.97□□□□□ -0.33
RKR1Q04781 YPT11YNL304W 1254 nt12.97□□□□□ -0.33
RKR1Q04781 snR31snR31 225 nt12.97□□□□□ -0.33
RKR1Q04781 RPS6AYPL090C 711 nt12.95□□□□□ -0.34
RKR1Q04781 RPS6BYBR181C 711 nt12.95□□□□□ -0.34
RKR1Q04781 TAD2YJL035C 753 nt12.94□□□□□ -0.34
RKR1Q04781 YBL095WYBL095W 813 nt12.94□□□□□ -0.34
RKR1Q04781 PTC6YCR079W 1329 nt12.93□□□□□ -0.34
RKR1Q04781 YER156CYER156C 1017 nt12.92□□□□□ -0.34
RKR1Q04781 SRY1YKL218C 981 nt12.92□□□□□ -0.34
RKR1Q04781 GID8YMR135C 1368 nt12.92□□□□□ -0.34
RKR1Q04781 YFR020WYFR020W 699 nt12.91□□□□□ -0.34
RKR1Q04781 YJL043WYJL043W 774 nt12.91□□□□□ -0.34
RKR1Q04781 KGD2YDR148C 1392 nt12.9□□□□□ -0.34
RKR1Q04781 BXI1YNL305C 894 nt12.89□□□□□ -0.35
RKR1Q04781 MRS6YOR370C 1812 nt12.88□□□□□ -0.35
RKR1Q04781 NUP53YMR153W 1428 nt12.86□□□□□ -0.35
RKR1Q04781 RPN14YGL004C 1254 nt12.86□□□□□ -0.35
RKR1Q04781 RSM7YJR113C 744 nt12.86□□□□□ -0.35
RKR1Q04781 TDH1YJL052W 999 nt12.84□□□□□ -0.35
RKR1Q04781 CAK1YFL029C 1107 nt12.83□□□□□ -0.36
RKR1Q04781 SNX3YOR357C 489 nt12.83□□□□□ -0.36
RKR1Q04781 ARO8YGL202W 1503 nt12.83□□□□□ -0.36
RKR1Q04781 GAS1YMR307W 1680 nt12.82□□□□□ -0.36
RKR1Q04781 RPR1RPR1 369 nt12.82□□□□□ -0.36
RKR1Q04781 OCH1YGL038C 1443 nt12.82□□□□□ -0.36
RKR1Q04781 YHR219WYHR219W 1875 nt12.81□□□□□ -0.36
RKR1Q04781 YKL133CYKL133C 1392 nt12.81□□□□□ -0.36
RKR1Q04781 MCH5YOR306C 1566 nt12.81□□□□□ -0.36
RKR1Q04781 KES1YPL145C 1305 nt12.79□□□□□ -0.36
RKR1Q04781 YPR084WYPR084W 1371 nt12.78□□□□□ -0.36
RKR1Q04781 YIL168WYIL168W 384 nt12.78□□□□□ -0.36
RKR1Q04781 YLR358CYLR358C 564 nt12.77□□□□□ -0.36
RKR1Q04781 MET22YOL064C 1074 nt12.76□□□□□ -0.37
RKR1Q04781 SBP1YHL034C 885 nt12.73□□□□□ -0.37
RKR1Q04781 RRT14YIL127C 621 nt12.73□□□□□ -0.37
RKR1Q04781 CHS7YHR142W 951 nt12.73□□□□□ -0.37
RKR1Q04781 YDR510C-AYDR510C-A 117 nt12.72□□□□□ -0.37
RKR1Q04781 HAC1YFL031W 717 nt12.72□□□□□ -0.37
RKR1Q04781 COQ8YGL119W 1506 nt12.72□□□□□ -0.37
RKR1Q04781 MUP1YGR055W 1725 nt12.71□□□□□ -0.37
RKR1Q04781 URA1YKL216W 945 nt12.7□□□□□ -0.38
RKR1Q04781 MAS2YHR024C 1449 nt12.7□□□□□ -0.38
RKR1Q04781 NCA3YJL116C 1014 nt12.69□□□□□ -0.38
RKR1Q04781 YLR460CYLR460C 1131 nt12.69□□□□□ -0.38
RKR1Q04781 RRT6YGL146C 936 nt12.69□□□□□ -0.38
RKR1Q04781 SHC1YER096W 1539 nt12.65□□□□□ -0.38
RKR1Q04781 SPT20YOL148C 1815 nt12.61□□□□□ -0.39
RKR1Q04781 YML079WYML079W 606 nt12.6□□□□□ -0.39
RKR1Q04781 RPD3YNL330C 1302 nt12.6□□□□□ -0.39
RKR1Q04781 RHO1YPR165W 630 nt12.6□□□□□ -0.39
RKR1Q04781 PDC6YGR087C 1692 nt12.6□□□□□ -0.39
RKR1Q04781 SGA1YIL099W 1650 nt12.6□□□□□ -0.39
RKR1Q04781 NVJ2YPR091C 2313 nt12.59□□□□□ -0.39
RKR1Q04781 PUP2YGR253C 783 nt12.58□□□□□ -0.4
RKR1Q04781 RNA170RNA170 169 nt12.58□□□□□ -0.4
RKR1Q04781 YOR111WYOR111W 699 nt12.57□□□□□ -0.4
RKR1Q04781 YMR316C-BYMR316C-B 309 nt12.56□□□□□ -0.4
RKR1Q04781 THI3YDL080C 1830 nt12.55□□□□□ -0.4
RKR1Q04781 YPT31YER031C 672 nt12.55□□□□□ -0.4
RKR1Q04781 YJL144WYJL144W 315 nt12.52□□□□□ -0.41
RKR1Q04781 HOL1YNR055C 1761 nt12.51□□□□□ -0.41
RKR1Q04781 RPC31YNL151C 756 nt12.51□□□□□ -0.41
RKR1Q04781 OLA1YBR025C 1185 nt12.51□□□□□ -0.41
RKR1Q04781 YDR476CYDR476C 675 nt12.5□□□□□ -0.41
RKR1Q04781 APT1YML022W 564 nt12.49□□□□□ -0.41
RKR1Q04781 GGA2YHR108W 1758 nt12.48□□□□□ -0.41
RKR1Q04781 ZAP1YJL056C 2643 nt12.48□□□□□ -0.41
RKR1Q04781 ATP2YJR121W 1536 nt12.48□□□□□ -0.41
RKR1Q04781 THI73YLR004C 1572 nt12.47□□□□□ -0.41
RKR1Q04781 YHL030W-AYHL030W-A 462 nt12.46□□□□□ -0.42
RKR1Q04781 UGP1YKL035W 1500 nt12.45□□□□□ -0.42
RKR1Q04781 PUP3YER094C 618 nt12.43□□□□□ -0.42
RKR1Q04781 GPM1YKL152C 744 nt12.43□□□□□ -0.42
Retrieved 100 of 7,029 protein–RNA pairs in 193.3 ms