Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 PSD1YNL169C 1503 nt8.4□□□□□ -1.06
RPN9Q04062 KGD2YDR148C 1392 nt8.39□□□□□ -1.07
RPN9Q04062 MCM5YLR274W 2328 nt8.39□□□□□ -1.07
RPN9Q04062 PHB2YGR231C 933 nt8.39□□□□□ -1.07
RPN9Q04062 SRP54YPR088C 1626 nt8.39□□□□□ -1.07
RPN9Q04062 tA(AGC)DtA(AGC)D 73 nt8.38□□□□□ -1.07
RPN9Q04062 tA(AGC)FtA(AGC)F 73 nt8.38□□□□□ -1.07
RPN9Q04062 tA(AGC)GtA(AGC)G 73 nt8.38□□□□□ -1.07
RPN9Q04062 tA(AGC)HtA(AGC)H 73 nt8.38□□□□□ -1.07
RPN9Q04062 tA(AGC)JtA(AGC)J 73 nt8.38□□□□□ -1.07
RPN9Q04062 tA(AGC)K1tA(AGC)K1 73 nt8.38□□□□□ -1.07
RPN9Q04062 tA(AGC)K2tA(AGC)K2 73 nt8.38□□□□□ -1.07
RPN9Q04062 tA(AGC)LtA(AGC)L 73 nt8.38□□□□□ -1.07
RPN9Q04062 tA(AGC)M1tA(AGC)M1 73 nt8.38□□□□□ -1.07
RPN9Q04062 tA(AGC)M2tA(AGC)M2 73 nt8.38□□□□□ -1.07
RPN9Q04062 tA(AGC)PtA(AGC)P 73 nt8.38□□□□□ -1.07
RPN9Q04062 FLX1YIL134W 936 nt8.37□□□□□ -1.07
RPN9Q04062 ADH3YMR083W 1128 nt8.37□□□□□ -1.07
RPN9Q04062 PUP1YOR157C 786 nt8.37□□□□□ -1.07
RPN9Q04062 IPL1YPL209C 1104 nt8.37□□□□□ -1.07
RPN9Q04062 ALR1YOL130W 2580 nt8.36□□□□□ -1.07
RPN9Q04062 YHR218WYHR218W 1812 nt8.36□□□□□ -1.07
RPN9Q04062 SDS24YBR214W 1584 nt8.36□□□□□ -1.07
RPN9Q04062 YIL177CYIL177C 5277 nt8.35□□□□□ -1.07
RPN9Q04062 SBP1YHL034C 885 nt8.35□□□□□ -1.07
RPN9Q04062 YKR012CYKR012C 378 nt8.35□□□□□ -1.07
RPN9Q04062 YPT11YNL304W 1254 nt8.35□□□□□ -1.07
RPN9Q04062 FRA1YLL029W 2250 nt8.34□□□□□ -1.07
RPN9Q04062 VBA3YCL069W 1377 nt8.33□□□□□ -1.08
RPN9Q04062 HXT10YFL011W 1641 nt8.32□□□□□ -1.08
RPN9Q04062 LEU4YNL104C 1860 nt8.32□□□□□ -1.08
RPN9Q04062 YMR316C-BYMR316C-B 309 nt8.31□□□□□ -1.08
RPN9Q04062 CYT1YOR065W 930 nt8.31□□□□□ -1.08
RPN9Q04062 MDL2YPL270W 2322 nt8.31□□□□□ -1.08
RPN9Q04062 TPN1YGL186C 1740 nt8.3□□□□□ -1.08
RPN9Q04062 INH1YDL181W 258 nt8.3□□□□□ -1.08
RPN9Q04062 GAS1YMR307W 1680 nt8.3□□□□□ -1.08
RPN9Q04062 tE(CUC)DtE(CUC)D 72 nt8.29□□□□□ -1.08
RPN9Q04062 tE(CUC)ItE(CUC)I 72 nt8.29□□□□□ -1.08
RPN9Q04062 MOB1YIL106W 945 nt8.29□□□□□ -1.08
RPN9Q04062 CYC3YAL039C 810 nt8.29□□□□□ -1.08
RPN9Q04062 GGA2YHR108W 1758 nt8.29□□□□□ -1.08
RPN9Q04062 ENO1YGR254W 1314 nt8.29□□□□□ -1.08
RPN9Q04062 AGP3YFL055W 1677 nt8.28□□□□□ -1.08
RPN9Q04062 YCR025CYCR025C 411 nt8.28□□□□□ -1.08
RPN9Q04062 LYS20YDL182W 1287 nt8.28□□□□□ -1.08
RPN9Q04062 YDR467CYDR467C 327 nt8.28□□□□□ -1.08
RPN9Q04062 GPM1YKL152C 744 nt8.28□□□□□ -1.08
RPN9Q04062 SRP102YKL154W 735 nt8.28□□□□□ -1.08
RPN9Q04062 TOM71YHR117W 1920 nt8.27□□□□□ -1.09
RPN9Q04062 THI3YDL080C 1830 nt8.27□□□□□ -1.09
RPN9Q04062 PTC6YCR079W 1329 nt8.27□□□□□ -1.09
RPN9Q04062 YFR020WYFR020W 699 nt8.25□□□□□ -1.09
RPN9Q04062 YOR072WYOR072W 315 nt8.24□□□□□ -1.09
RPN9Q04062 SLG1YOR008C 1137 nt8.23□□□□□ -1.09
RPN9Q04062 RSC4YKR008W 1878 nt8.22□□□□□ -1.09
RPN9Q04062 SER2YGR208W 930 nt8.22□□□□□ -1.09
RPN9Q04062 RSM7YJR113C 744 nt8.22□□□□□ -1.09
RPN9Q04062 YBL095WYBL095W 813 nt8.22□□□□□ -1.09
RPN9Q04062 YCP4YCR004C 744 nt8.21□□□□□ -1.1
RPN9Q04062 SWM1YDR260C 513 nt8.2□□□□□ -1.1
RPN9Q04062 AAC3YBR085W 924 nt8.2□□□□□ -1.1
RPN9Q04062 HTS1YPR033C 1641 nt8.19□□□□□ -1.1
RPN9Q04062 YLR280CYLR280C 351 nt8.19□□□□□ -1.1
RPN9Q04062 NPP2YEL016C 1482 nt8.19□□□□□ -1.1
RPN9Q04062 ERO1YML130C 1692 nt8.18□□□□□ -1.1
RPN9Q04062 TMS1YDR105C 1422 nt8.18□□□□□ -1.1
RPN9Q04062 YDR306CYDR306C 1437 nt8.18□□□□□ -1.1
RPN9Q04062 SAM50YNL026W 1455 nt8.15□□□□□ -1.1
RPN9Q04062 MEX67YPL169C 1800 nt8.15□□□□□ -1.11
RPN9Q04062 LPD1YFL018C 1500 nt8.14□□□□□ -1.11
RPN9Q04062 YMC2YBR104W 990 nt8.14□□□□□ -1.11
RPN9Q04062 YIR035CYIR035C 765 nt8.13□□□□□ -1.11
RPN9Q04062 MRS4YKR052C 915 nt8.13□□□□□ -1.11
RPN9Q04062 NBA1YOL070C 1506 nt8.13□□□□□ -1.11
RPN9Q04062 YGR210CYGR210C 1236 nt8.12□□□□□ -1.11
RPN9Q04062 YLR460CYLR460C 1131 nt8.11□□□□□ -1.11
RPN9Q04062 Q0010Q0010 387 nt8.11□□□□□ -1.11
RPN9Q04062 DUR3YHL016C 2208 nt8.11□□□□□ -1.11
RPN9Q04062 YPL108WYPL108W 507 nt8.1□□□□□ -1.11
RPN9Q04062 NSG2YNL156C 900 nt8.09□□□□□ -1.11
RPN9Q04062 YMR007WYMR007W 381 nt8.08□□□□□ -1.12
RPN9Q04062 YMR166CYMR166C 1107 nt8.08□□□□□ -1.12
RPN9Q04062 AAT1YKL106W 1356 nt8.08□□□□□ -1.12
RPN9Q04062 FET5YFL041W 1869 nt8.07□□□□□ -1.12
RPN9Q04062 UFD1YGR048W 1086 nt8.07□□□□□ -1.12
RPN9Q04062 CHS7YHR142W 951 nt8.07□□□□□ -1.12
RPN9Q04062 YBR056WYBR056W 1506 nt8.07□□□□□ -1.12
RPN9Q04062 YLR173WYLR173W 1827 nt8.06□□□□□ -1.12
RPN9Q04062 TGA1tA(UGC)A 73 nt8.06□□□□□ -1.12
RPN9Q04062 tA(UGC)EtA(UGC)E 73 nt8.06□□□□□ -1.12
RPN9Q04062 tA(UGC)GtA(UGC)G 73 nt8.06□□□□□ -1.12
RPN9Q04062 tA(UGC)LtA(UGC)L 73 nt8.06□□□□□ -1.12
RPN9Q04062 tA(UGC)OtA(UGC)O 73 nt8.06□□□□□ -1.12
RPN9Q04062 BUB2YMR055C 921 nt8.06□□□□□ -1.12
RPN9Q04062 MET22YOL064C 1074 nt8.06□□□□□ -1.12
RPN9Q04062 RNA170RNA170 169 nt8.05□□□□□ -1.12
RPN9Q04062 OCH1YGL038C 1443 nt8.04□□□□□ -1.12
RPN9Q04062 YLR072WYLR072W 2082 nt8.04□□□□□ -1.12
RPN9Q04062 THI6YPL214C 1623 nt8.04□□□□□ -1.12
Retrieved 100 of 7,029 protein–RNA pairs in 32.3 ms