Protein–RNA interactions for Protein: Q03834

MSH6, DNA mismatch repair protein MSH6, yeastyeast

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH6Q03834 SAC7YDR389W 1965 nt8.92□□□□□ -0.98
MSH6Q03834 tS(GCU)LtS(GCU)L 80 nt8.91□□□□□ -0.98
MSH6Q03834 ELO1YJL196C 933 nt8.91□□□□□ -0.98
MSH6Q03834 SFL1YOR140W 2301 nt8.89□□□□□ -0.99
MSH6Q03834 YDR306CYDR306C 1437 nt8.89□□□□□ -0.99
MSH6Q03834 YFR036W-AYFR036W-A 651 nt8.89□□□□□ -0.99
MSH6Q03834 POT1YIL160C 1254 nt8.89□□□□□ -0.99
MSH6Q03834 YBR232CYBR232C 360 nt8.89□□□□□ -0.99
MSH6Q03834 RPC31YNL151C 756 nt8.88□□□□□ -0.99
MSH6Q03834 TPN1YGL186C 1740 nt8.88□□□□□ -0.99
MSH6Q03834 KEL3YPL263C 1956 nt8.88□□□□□ -0.99
MSH6Q03834 TOM71YHR117W 1920 nt8.88□□□□□ -0.99
MSH6Q03834 YMR265CYMR265C 1386 nt8.87□□□□□ -0.99
MSH6Q03834 MDL2YPL270W 2322 nt8.87□□□□□ -0.99
MSH6Q03834 PAU5YFL020C 369 nt8.87□□□□□ -0.99
MSH6Q03834 SPS100YHR139C 981 nt8.87□□□□□ -0.99
MSH6Q03834 RMA1YKL132C 1293 nt8.87□□□□□ -0.99
MSH6Q03834 SKG1YKR100C 1068 nt8.86□□□□□ -0.99
MSH6Q03834 YOR072WYOR072W 315 nt8.86□□□□□ -0.99
MSH6Q03834 HAP5YOR358W 729 nt8.86□□□□□ -0.99
MSH6Q03834 snR31snR31 225 nt8.86□□□□□ -0.99
MSH6Q03834 MCM5YLR274W 2328 nt8.85□□□□□ -0.99
MSH6Q03834 TVP23YDR084C 600 nt8.85□□□□□ -0.99
MSH6Q03834 AST1YBL069W 1290 nt8.85□□□□□ -0.99
MSH6Q03834 ENO2YHR174W 1314 nt8.84□□□□□ -0.99
MSH6Q03834 INH1YDL181W 258 nt8.84□□□□□ -0.99
MSH6Q03834 NIF3YGL221C 867 nt8.84□□□□□ -0.99
MSH6Q03834 PCP1YGR101W 1041 nt8.84□□□□□ -0.99
MSH6Q03834 YJL107CYJL107C 1164 nt8.84□□□□□ -0.99
MSH6Q03834 APS2YJR058C 444 nt8.84□□□□□ -0.99
MSH6Q03834 OPI3YJR073C 621 nt8.84□□□□□ -0.99
MSH6Q03834 HXT10YFL011W 1641 nt8.83□□□□□ -1
MSH6Q03834 STP3YLR375W 1032 nt8.83□□□□□ -1
MSH6Q03834 EEB1YPL095C 1371 nt8.83□□□□□ -1
MSH6Q03834 YJL211CYJL211C 444 nt8.82□□□□□ -1
MSH6Q03834 GSF2YML048W 1212 nt8.82□□□□□ -1
MSH6Q03834 RIM2YBR192W 1134 nt8.82□□□□□ -1
MSH6Q03834 DUR3YHL016C 2208 nt8.81□□□□□ -1
MSH6Q03834 TUB4YLR212C 1422 nt8.81□□□□□ -1
MSH6Q03834 MEX67YPL169C 1800 nt8.8□□□□□ -1
MSH6Q03834 RSM23YGL129C 1353 nt8.8□□□□□ -1
MSH6Q03834 YLR173WYLR173W 1827 nt8.8□□□□□ -1
MSH6Q03834 HOS2YGL194C 1359 nt8.79□□□□□ -1
MSH6Q03834 COX16YJL003W 357 nt8.78□□□□□ -1
MSH6Q03834 CDD1YLR245C 429 nt8.78□□□□□ -1
MSH6Q03834 ATG22YCL038C 1587 nt8.78□□□□□ -1
MSH6Q03834 AMF1YOR378W 1548 nt8.77□□□□□ -1.01
MSH6Q03834 YDR467CYDR467C 327 nt8.77□□□□□ -1.01
MSH6Q03834 PET20YPL159C 762 nt8.77□□□□□ -1.01
MSH6Q03834 SUV3YPL029W 2214 nt8.76□□□□□ -1.01
MSH6Q03834 SEN2YLR105C 1134 nt8.76□□□□□ -1.01
MSH6Q03834 APM1YPL259C 1428 nt8.75□□□□□ -1.01
MSH6Q03834 THP3YPR045C 1413 nt8.75□□□□□ -1.01
MSH6Q03834 YNR068CYNR068C 819 nt8.75□□□□□ -1.01
MSH6Q03834 DPL1YDR294C 1770 nt8.74□□□□□ -1.01
MSH6Q03834 IDP3YNL009W 1263 nt8.74□□□□□ -1.01
MSH6Q03834 KRE1YNL322C 942 nt8.74□□□□□ -1.01
MSH6Q03834 AGP3YFL055W 1677 nt8.74□□□□□ -1.01
MSH6Q03834 LEU4YNL104C 1860 nt8.73□□□□□ -1.01
MSH6Q03834 NSG2YNL156C 900 nt8.73□□□□□ -1.01
MSH6Q03834 CRC1YOR100C 984 nt8.73□□□□□ -1.01
MSH6Q03834 SCO2YBR024W 906 nt8.73□□□□□ -1.01
MSH6Q03834 THI6YPL214C 1623 nt8.72□□□□□ -1.01
MSH6Q03834 PAR32YDL173W 888 nt8.72□□□□□ -1.01
MSH6Q03834 YMR147WYMR147W 672 nt8.72□□□□□ -1.01
MSH6Q03834 SWT21YNL187W 1074 nt8.72□□□□□ -1.01
MSH6Q03834 MET1YKR069W 1782 nt8.71□□□□□ -1.01
MSH6Q03834 snR78snR78 87 nt8.71□□□□□ -1.02
MSH6Q03834 NAS2YIL007C 663 nt8.71□□□□□ -1.02
MSH6Q03834 YJL064WYJL064W 396 nt8.71□□□□□ -1.02
MSH6Q03834 PUP1YOR157C 786 nt8.71□□□□□ -1.02
MSH6Q03834 ADE5,7YGL234W 2409 nt8.7□□□□□ -1.02
MSH6Q03834 Q0144Q0144 330 nt8.69□□□□□ -1.02
MSH6Q03834 YBL081WYBL081W 1107 nt8.69□□□□□ -1.02
MSH6Q03834 PIC2YER053C 903 nt8.68□□□□□ -1.02
MSH6Q03834 TPC1YGR096W 945 nt8.68□□□□□ -1.02
MSH6Q03834 PAU19YMR325W 375 nt8.68□□□□□ -1.02
MSH6Q03834 LEU2YCL018W 1095 nt8.68□□□□□ -1.02
MSH6Q03834 YKL053WYKL053W 375 nt8.66□□□□□ -1.02
MSH6Q03834 NAP1YKR048C 1254 nt8.66□□□□□ -1.02
MSH6Q03834 SPE2YOL052C 1191 nt8.66□□□□□ -1.02
MSH6Q03834 PZF1YPR186C 1290 nt8.66□□□□□ -1.02
MSH6Q03834 GCD11YER025W 1584 nt8.65□□□□□ -1.02
MSH6Q03834 KGD2YDR148C 1392 nt8.65□□□□□ -1.02
MSH6Q03834 GPM1YKL152C 744 nt8.65□□□□□ -1.02
MSH6Q03834 YBL095WYBL095W 813 nt8.65□□□□□ -1.02
MSH6Q03834 RTG2YGL252C 1767 nt8.65□□□□□ -1.02
MSH6Q03834 NBA1YOL070C 1506 nt8.64□□□□□ -1.03
MSH6Q03834 IGD1YFR017C 588 nt8.64□□□□□ -1.03
MSH6Q03834 SBP1YHL034C 885 nt8.64□□□□□ -1.03
MSH6Q03834 YMC2YBR104W 990 nt8.64□□□□□ -1.03
MSH6Q03834 tE(CUC)DtE(CUC)D 72 nt8.63□□□□□ -1.03
MSH6Q03834 tE(CUC)ItE(CUC)I 72 nt8.63□□□□□ -1.03
MSH6Q03834 UFD1YGR048W 1086 nt8.62□□□□□ -1.03
MSH6Q03834 NPP2YEL016C 1482 nt8.62□□□□□ -1.03
MSH6Q03834 GGA2YHR108W 1758 nt8.61□□□□□ -1.03
MSH6Q03834 YGL118CYGL118C 438 nt8.61□□□□□ -1.03
MSH6Q03834 URE2YNL229C 1065 nt8.61□□□□□ -1.03
MSH6Q03834 ICE2YIL090W 1476 nt8.61□□□□□ -1.03
MSH6Q03834 NAM8YHR086W 1572 nt8.61□□□□□ -1.03
Retrieved 100 of 7,029 protein–RNA pairs in 30.6 ms