Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 SAM50YNL026W 1455 nt8.89□□□□□ -0.99
RPA49Q01080 YCP4YCR004C 744 nt8.88□□□□□ -0.99
RPA49Q01080 SBP1YHL034C 885 nt8.88□□□□□ -0.99
RPA49Q01080 YPT11YNL304W 1254 nt8.88□□□□□ -0.99
RPA49Q01080 LYS20YDL182W 1287 nt8.87□□□□□ -0.99
RPA49Q01080 SER2YGR208W 930 nt8.86□□□□□ -0.99
RPA49Q01080 YLR280CYLR280C 351 nt8.86□□□□□ -0.99
RPA49Q01080 GAS1YMR307W 1680 nt8.85□□□□□ -0.99
RPA49Q01080 PTC6YCR079W 1329 nt8.84□□□□□ -0.99
RPA49Q01080 SRP102YKL154W 735 nt8.84□□□□□ -0.99
RPA49Q01080 YHR218WYHR218W 1812 nt8.83□□□□□ -1
RPA49Q01080 PSD1YNL169C 1503 nt8.83□□□□□ -1
RPA49Q01080 HXT10YFL011W 1641 nt8.83□□□□□ -1
RPA49Q01080 LEU4YNL104C 1860 nt8.82□□□□□ -1
RPA49Q01080 HTS1YPR033C 1641 nt8.82□□□□□ -1
RPA49Q01080 ERO1YML130C 1692 nt8.81□□□□□ -1
RPA49Q01080 RSM7YJR113C 744 nt8.81□□□□□ -1
RPA49Q01080 YDR467CYDR467C 327 nt8.8□□□□□ -1
RPA49Q01080 YFR020WYFR020W 699 nt8.8□□□□□ -1
RPA49Q01080 GGA2YHR108W 1758 nt8.78□□□□□ -1
RPA49Q01080 TGA1tA(UGC)A 73 nt8.78□□□□□ -1
RPA49Q01080 tA(UGC)EtA(UGC)E 73 nt8.78□□□□□ -1
RPA49Q01080 tA(UGC)GtA(UGC)G 73 nt8.78□□□□□ -1
RPA49Q01080 tA(UGC)LtA(UGC)L 73 nt8.78□□□□□ -1
RPA49Q01080 tA(UGC)OtA(UGC)O 73 nt8.78□□□□□ -1
RPA49Q01080 SWM1YDR260C 513 nt8.78□□□□□ -1
RPA49Q01080 YGR210CYGR210C 1236 nt8.78□□□□□ -1
RPA49Q01080 GPM1YKL152C 744 nt8.78□□□□□ -1
RPA49Q01080 YIA6YIL006W 1122 nt8.77□□□□□ -1.01
RPA49Q01080 CYT1YOR065W 930 nt8.77□□□□□ -1.01
RPA49Q01080 THI3YDL080C 1830 nt8.76□□□□□ -1.01
RPA49Q01080 INH1YDL181W 258 nt8.76□□□□□ -1.01
RPA49Q01080 FCY1YPR062W 477 nt8.76□□□□□ -1.01
RPA49Q01080 AGP3YFL055W 1677 nt8.75□□□□□ -1.01
RPA49Q01080 tE(CUC)DtE(CUC)D 72 nt8.75□□□□□ -1.01
RPA49Q01080 tE(CUC)ItE(CUC)I 72 nt8.75□□□□□ -1.01
RPA49Q01080 YMR007WYMR007W 381 nt8.75□□□□□ -1.01
RPA49Q01080 RIB1YBL033C 1038 nt8.75□□□□□ -1.01
RPA49Q01080 YMR316C-BYMR316C-B 309 nt8.75□□□□□ -1.01
RPA49Q01080 MAE1YKL029C 2010 nt8.75□□□□□ -1.01
RPA49Q01080 YRF1-2YER190W 5046 nt8.73□□□□□ -1.01
RPA49Q01080 SOD2YHR008C 702 nt8.73□□□□□ -1.01
RPA49Q01080 RCR1YBR005W 642 nt8.72□□□□□ -1.01
RPA49Q01080 YLR460CYLR460C 1131 nt8.71□□□□□ -1.02
RPA49Q01080 YBL095WYBL095W 813 nt8.71□□□□□ -1.02
RPA49Q01080 YMC2YBR104W 990 nt8.71□□□□□ -1.02
RPA49Q01080 YPL108WYPL108W 507 nt8.69□□□□□ -1.02
RPA49Q01080 NPP2YEL016C 1482 nt8.69□□□□□ -1.02
RPA49Q01080 ERG6YML008C 1152 nt8.68□□□□□ -1.02
RPA49Q01080 LSP1YPL004C 1026 nt8.66□□□□□ -1.02
RPA49Q01080 GID7YCL039W 2238 nt8.66□□□□□ -1.02
RPA49Q01080 CHS7YHR142W 951 nt8.65□□□□□ -1.02
RPA49Q01080 MRS4YKR052C 915 nt8.65□□□□□ -1.02
RPA49Q01080 YMR166CYMR166C 1107 nt8.65□□□□□ -1.02
RPA49Q01080 YDR510C-AYDR510C-A 117 nt8.64□□□□□ -1.03
RPA49Q01080 OLA1YBR025C 1185 nt8.63□□□□□ -1.03
RPA49Q01080 AAC3YBR085W 924 nt8.63□□□□□ -1.03
RPA49Q01080 YIR035CYIR035C 765 nt8.62□□□□□ -1.03
RPA49Q01080 YJR149WYJR149W 1215 nt8.61□□□□□ -1.03
RPA49Q01080 MET22YOL064C 1074 nt8.61□□□□□ -1.03
RPA49Q01080 TMS1YDR105C 1422 nt8.61□□□□□ -1.03
RPA49Q01080 CAK1YFL029C 1107 nt8.6□□□□□ -1.03
RPA49Q01080 YJL009WYJL009W 327 nt8.59□□□□□ -1.03
RPA49Q01080 YJL160CYJL160C 864 nt8.59□□□□□ -1.03
RPA49Q01080 OCH1YGL038C 1443 nt8.59□□□□□ -1.03
RPA49Q01080 AAT1YKL106W 1356 nt8.59□□□□□ -1.03
RPA49Q01080 TPN1YGL186C 1740 nt8.58□□□□□ -1.04
RPA49Q01080 RRT14YIL127C 621 nt8.58□□□□□ -1.04
RPA49Q01080 YHL008CYHL008C 1884 nt8.57□□□□□ -1.04
RPA49Q01080 MTO1YGL236C 2010 nt8.56□□□□□ -1.04
RPA49Q01080 FET5YFL041W 1869 nt8.56□□□□□ -1.04
RPA49Q01080 BUB2YMR055C 921 nt8.56□□□□□ -1.04
RPA49Q01080 EMC3YKL207W 762 nt8.55□□□□□ -1.04
RPA49Q01080 YMR210WYMR210W 1350 nt8.55□□□□□ -1.04
RPA49Q01080 NBA1YOL070C 1506 nt8.54□□□□□ -1.04
RPA49Q01080 PDC6YGR087C 1692 nt8.54□□□□□ -1.04
RPA49Q01080 POP2YNR052C 1302 nt8.54□□□□□ -1.04
RPA49Q01080 PET18YCR020C 648 nt8.53□□□□□ -1.04
RPA49Q01080 RNA170RNA170 169 nt8.53□□□□□ -1.04
RPA49Q01080 YER152W-AYER152W-A 567 nt8.52□□□□□ -1.05
RPA49Q01080 MCM5YLR274W 2328 nt8.52□□□□□ -1.05
RPA49Q01080 TPO4YOR273C 1980 nt8.52□□□□□ -1.05
RPA49Q01080 TRP2YER090W 1524 nt8.5□□□□□ -1.05
RPA49Q01080 snR86snR86 1004 nt8.5□□□□□ -1.05
RPA49Q01080 YPT31YER031C 672 nt8.5□□□□□ -1.05
RPA49Q01080 THI6YPL214C 1623 nt8.5□□□□□ -1.05
RPA49Q01080 MET2YNL277W 1461 nt8.5□□□□□ -1.05
RPA49Q01080 YBR056WYBR056W 1506 nt8.49□□□□□ -1.05
RPA49Q01080 NPP1YCR026C 2229 nt8.49□□□□□ -1.05
RPA49Q01080 MFT1YML062C 1179 nt8.49□□□□□ -1.05
RPA49Q01080 RHO1YPR165W 630 nt8.49□□□□□ -1.05
RPA49Q01080 MEP1YGR121C 1479 nt8.49□□□□□ -1.05
RPA49Q01080 YLR072WYLR072W 2082 nt8.48□□□□□ -1.05
RPA49Q01080 MAS1YLR163C 1389 nt8.48□□□□□ -1.05
RPA49Q01080 YPR084WYPR084W 1371 nt8.48□□□□□ -1.05
RPA49Q01080 SFP1YLR403W 2052 nt8.47□□□□□ -1.05
RPA49Q01080 GRH1YDR517W 1119 nt8.47□□□□□ -1.05
RPA49Q01080 HXT11YOL156W 1704 nt8.46□□□□□ -1.05
RPA49Q01080 YMR206WYMR206W 942 nt8.46□□□□□ -1.06
RPA49Q01080 RPS6AYPL090C 711 nt8.46□□□□□ -1.06
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms