Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 EHD3YDR036C 1503 nt8.84□□□□□ -0.99
SUB1P54000 RAD23YEL037C 1197 nt8.83□□□□□ -1
SUB1P54000 MIM1YOL026C 342 nt8.83□□□□□ -1
SUB1P54000 CIT3YPR001W 1461 nt8.83□□□□□ -1
SUB1P54000 HEL1YKR017C 1656 nt8.82□□□□□ -1
SUB1P54000 YDR467CYDR467C 327 nt8.82□□□□□ -1
SUB1P54000 YMR265CYMR265C 1386 nt8.81□□□□□ -1
SUB1P54000 LOT5YKL183W 921 nt8.8□□□□□ -1
SUB1P54000 GFA1YKL104C 2154 nt8.79□□□□□ -1
SUB1P54000 tE(CUC)DtE(CUC)D 72 nt8.79□□□□□ -1
SUB1P54000 tE(CUC)ItE(CUC)I 72 nt8.79□□□□□ -1
SUB1P54000 RIB3YDR487C 627 nt8.78□□□□□ -1
SUB1P54000 VRG4YGL225W 1014 nt8.78□□□□□ -1
SUB1P54000 SUV3YPL029W 2214 nt8.78□□□□□ -1
SUB1P54000 PMA2YPL036W 2844 nt8.78□□□□□ -1
SUB1P54000 TRP2YER090W 1524 nt8.77□□□□□ -1.01
SUB1P54000 IMO32YGR031W 1029 nt8.77□□□□□ -1.01
SUB1P54000 UFD1YGR048W 1086 nt8.77□□□□□ -1.01
SUB1P54000 YNR064CYNR064C 873 nt8.77□□□□□ -1.01
SUB1P54000 RRT8YOL048C 1029 nt8.77□□□□□ -1.01
SUB1P54000 HAP5YOR358W 729 nt8.77□□□□□ -1.01
SUB1P54000 GPA1YHR005C 1419 nt8.77□□□□□ -1.01
SUB1P54000 CKI1YLR133W 1749 nt8.77□□□□□ -1.01
SUB1P54000 SHO1YER118C 1104 nt8.76□□□□□ -1.01
SUB1P54000 YOR041CYOR041C 432 nt8.76□□□□□ -1.01
SUB1P54000 HBS1YKR084C 1836 nt8.75□□□□□ -1.01
SUB1P54000 GAL3YDR009W 1563 nt8.74□□□□□ -1.01
SUB1P54000 YBR226CYBR226C 411 nt8.74□□□□□ -1.01
SUB1P54000 LSB3YFR024C-A 1380 nt8.73□□□□□ -1.01
SUB1P54000 ADE8YDR408C 645 nt8.73□□□□□ -1.01
SUB1P54000 YJR114WYJR114W 393 nt8.73□□□□□ -1.01
SUB1P54000 FRT1YOR324C 1809 nt8.73□□□□□ -1.01
SUB1P54000 BEM1YBR200W 1656 nt8.72□□□□□ -1.01
SUB1P54000 ASN2YGR124W 1719 nt8.72□□□□□ -1.01
SUB1P54000 KEL3YPL263C 1956 nt8.72□□□□□ -1.01
SUB1P54000 RPN14YGL004C 1254 nt8.72□□□□□ -1.01
SUB1P54000 YLR111WYLR111W 333 nt8.72□□□□□ -1.01
SUB1P54000 RIB7YBR153W 735 nt8.72□□□□□ -1.01
SUB1P54000 HXT12YIL170W 1374 nt8.72□□□□□ -1.01
SUB1P54000 CRC1YOR100C 984 nt8.71□□□□□ -1.02
SUB1P54000 ATP4YPL078C 735 nt8.71□□□□□ -1.02
SUB1P54000 MET30YIL046W 1923 nt8.71□□□□□ -1.02
SUB1P54000 HXT11YOL156W 1704 nt8.71□□□□□ -1.02
SUB1P54000 YOS9YDR057W 1629 nt8.7□□□□□ -1.02
SUB1P54000 OPI3YJR073C 621 nt8.7□□□□□ -1.02
SUB1P54000 DAK2YFL053W 1776 nt8.7□□□□□ -1.02
SUB1P54000 YRF1-3YGR296W 5580 nt8.7□□□□□ -1.02
SUB1P54000 YRF1-6YNL339C 5580 nt8.7□□□□□ -1.02
SUB1P54000 YRF1-7YPL283C 5580 nt8.7□□□□□ -1.02
SUB1P54000 MAK32YCR019W 1092 nt8.69□□□□□ -1.02
SUB1P54000 HGH1YGR187C 1185 nt8.69□□□□□ -1.02
SUB1P54000 GPM1YKL152C 744 nt8.69□□□□□ -1.02
SUB1P54000 YFR036W-AYFR036W-A 651 nt8.68□□□□□ -1.02
SUB1P54000 EMC3YKL207W 762 nt8.68□□□□□ -1.02
SUB1P54000 YNL190WYNL190W 615 nt8.68□□□□□ -1.02
SUB1P54000 YIP4YGL198W 708 nt8.67□□□□□ -1.02
SUB1P54000 AAT1YKL106W 1356 nt8.67□□□□□ -1.02
SUB1P54000 YLR437C-AYLR437C-A 228 nt8.67□□□□□ -1.02
SUB1P54000 YBL095WYBL095W 813 nt8.67□□□□□ -1.02
SUB1P54000 SRM1YGL097W 1449 nt8.66□□□□□ -1.02
SUB1P54000 YNL017CYNL017C 339 nt8.66□□□□□ -1.02
SUB1P54000 ORT1YOR130C 879 nt8.66□□□□□ -1.02
SUB1P54000 RIB2YOL066C 1776 nt8.66□□□□□ -1.02
SUB1P54000 YCR061WYCR061W 1896 nt8.64□□□□□ -1.03
SUB1P54000 RGT2YDL138W 2292 nt8.64□□□□□ -1.03
SUB1P54000 YMC2YBR104W 990 nt8.64□□□□□ -1.03
SUB1P54000 snR4snR4 186 nt8.64□□□□□ -1.03
SUB1P54000 LAS17YOR181W 1902 nt8.64□□□□□ -1.03
SUB1P54000 YPL277CYPL277C 1464 nt8.64□□□□□ -1.03
SUB1P54000 DUS3YLR401C 2007 nt8.63□□□□□ -1.03
SUB1P54000 YFL015W-AYFL015W-A 318 nt8.63□□□□□ -1.03
SUB1P54000 CDC16YKL022C 2523 nt8.63□□□□□ -1.03
SUB1P54000 KGD2YDR148C 1392 nt8.62□□□□□ -1.03
SUB1P54000 FIT1YDR534C 1587 nt8.62□□□□□ -1.03
SUB1P54000 GDA1YEL042W 1557 nt8.62□□□□□ -1.03
SUB1P54000 NMD5YJR132W 3147 nt8.62□□□□□ -1.03
SUB1P54000 FAF1YIL019W 1041 nt8.62□□□□□ -1.03
SUB1P54000 FTH1YBR207W 1398 nt8.61□□□□□ -1.03
SUB1P54000 SWT21YNL187W 1074 nt8.61□□□□□ -1.03
SUB1P54000 snR31snR31 225 nt8.61□□□□□ -1.03
SUB1P54000 THI3YDL080C 1830 nt8.61□□□□□ -1.03
SUB1P54000 SNU71YGR013W 1863 nt8.6□□□□□ -1.03
SUB1P54000 TVP23YDR084C 600 nt8.59□□□□□ -1.03
SUB1P54000 YKL053WYKL053W 375 nt8.59□□□□□ -1.03
SUB1P54000 GLR1YPL091W 1452 nt8.58□□□□□ -1.04
SUB1P54000 RRP46YGR095C 672 nt8.57□□□□□ -1.04
SUB1P54000 ESS1YJR017C 513 nt8.57□□□□□ -1.04
SUB1P54000 POX1YGL205W 2247 nt8.57□□□□□ -1.04
SUB1P54000 POP2YNR052C 1302 nt8.56□□□□□ -1.04
SUB1P54000 AFG2YLR397C 2343 nt8.56□□□□□ -1.04
SUB1P54000 FZF1YGL254W 900 nt8.56□□□□□ -1.04
SUB1P54000 GGA2YHR108W 1758 nt8.56□□□□□ -1.04
SUB1P54000 SNZ1YMR096W 894 nt8.55□□□□□ -1.04
SUB1P54000 YMR210WYMR210W 1350 nt8.55□□□□□ -1.04
SUB1P54000 ADH6YMR318C 1083 nt8.54□□□□□ -1.04
SUB1P54000 YLR072WYLR072W 2082 nt8.53□□□□□ -1.04
SUB1P54000 YMR316C-BYMR316C-B 309 nt8.53□□□□□ -1.04
SUB1P54000 KDX1YKL161C 1302 nt8.53□□□□□ -1.04
SUB1P54000 CTF3YLR381W 2202 nt8.52□□□□□ -1.05
SUB1P54000 RMA1YKL132C 1293 nt8.52□□□□□ -1.05
Retrieved 100 of 7,029 protein–RNA pairs in 26.6 ms