Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 tA(UGC)OtA(UGC)O 73 nt9.57□□□□□ -0.88
HDA1P53973 YIA6YIL006W 1122 nt9.57□□□□□ -0.88
HDA1P53973 CYC3YAL039C 810 nt9.57□□□□□ -0.88
HDA1P53973 RPN14YGL004C 1254 nt9.55□□□□□ -0.88
HDA1P53973 SOD2YHR008C 702 nt9.55□□□□□ -0.88
HDA1P53973 CWP2YKL096W-A 279 nt9.54□□□□□ -0.88
HDA1P53973 YLR280CYLR280C 351 nt9.54□□□□□ -0.88
HDA1P53973 YGL114WYGL114W 2178 nt9.53□□□□□ -0.88
HDA1P53973 ERO1YML130C 1692 nt9.53□□□□□ -0.88
HDA1P53973 RPC31YNL151C 756 nt9.53□□□□□ -0.88
HDA1P53973 ENO1YGR254W 1314 nt9.53□□□□□ -0.88
HDA1P53973 YGR210CYGR210C 1236 nt9.51□□□□□ -0.89
HDA1P53973 FRE6YLL051C 2139 nt9.5□□□□□ -0.89
HDA1P53973 SRP102YKL154W 735 nt9.5□□□□□ -0.89
HDA1P53973 HTS1YPR033C 1641 nt9.49□□□□□ -0.89
HDA1P53973 YFR020WYFR020W 699 nt9.49□□□□□ -0.89
HDA1P53973 CSM2YIL132C 642 nt9.48□□□□□ -0.89
HDA1P53973 YMR209CYMR209C 1374 nt9.48□□□□□ -0.89
HDA1P53973 MET8YBR213W 825 nt9.47□□□□□ -0.89
HDA1P53973 PTC6YCR079W 1329 nt9.47□□□□□ -0.89
HDA1P53973 THI3YDL080C 1830 nt9.47□□□□□ -0.89
HDA1P53973 GAS1YMR307W 1680 nt9.46□□□□□ -0.89
HDA1P53973 FCY1YPR062W 477 nt9.45□□□□□ -0.9
HDA1P53973 SBP1YHL034C 885 nt9.44□□□□□ -0.9
HDA1P53973 LEU4YNL104C 1860 nt9.43□□□□□ -0.9
HDA1P53973 POP2YNR052C 1302 nt9.43□□□□□ -0.9
HDA1P53973 YER152W-AYER152W-A 567 nt9.43□□□□□ -0.9
HDA1P53973 MDM35YKL053C-A 261 nt9.43□□□□□ -0.9
HDA1P53973 YMR316C-BYMR316C-B 309 nt9.42□□□□□ -0.9
HDA1P53973 YPT11YNL304W 1254 nt9.42□□□□□ -0.9
HDA1P53973 YMR007WYMR007W 381 nt9.41□□□□□ -0.9
HDA1P53973 YPL108WYPL108W 507 nt9.41□□□□□ -0.9
HDA1P53973 YJL160CYJL160C 864 nt9.4□□□□□ -0.9
HDA1P53973 PET18YCR020C 648 nt9.39□□□□□ -0.91
HDA1P53973 KRR1YCL059C 951 nt9.37□□□□□ -0.91
HDA1P53973 DMA2YNL116W 1569 nt9.36□□□□□ -0.91
HDA1P53973 HXT10YFL011W 1641 nt9.35□□□□□ -0.91
HDA1P53973 GPM1YKL152C 744 nt9.35□□□□□ -0.91
HDA1P53973 GGA2YHR108W 1758 nt9.35□□□□□ -0.91
HDA1P53973 EMC3YKL207W 762 nt9.33□□□□□ -0.92
HDA1P53973 LSP1YPL004C 1026 nt9.33□□□□□ -0.92
HDA1P53973 YDR467CYDR467C 327 nt9.32□□□□□ -0.92
HDA1P53973 tE(CUC)DtE(CUC)D 72 nt9.31□□□□□ -0.92
HDA1P53973 tE(CUC)ItE(CUC)I 72 nt9.31□□□□□ -0.92
HDA1P53973 RSM7YJR113C 744 nt9.31□□□□□ -0.92
HDA1P53973 RNA170RNA170 169 nt9.31□□□□□ -0.92
HDA1P53973 YMR210WYMR210W 1350 nt9.31□□□□□ -0.92
HDA1P53973 UTR5YEL035C 501 nt9.3□□□□□ -0.92
HDA1P53973 BUD20YLR074C 501 nt9.3□□□□□ -0.92
HDA1P53973 YHR218WYHR218W 1812 nt9.3□□□□□ -0.92
HDA1P53973 YMR166CYMR166C 1107 nt9.29□□□□□ -0.92
HDA1P53973 MET22YOL064C 1074 nt9.29□□□□□ -0.92
HDA1P53973 NPP2YEL016C 1482 nt9.28□□□□□ -0.92
HDA1P53973 CAK1YFL029C 1107 nt9.27□□□□□ -0.93
HDA1P53973 RCR1YBR005W 642 nt9.27□□□□□ -0.93
HDA1P53973 AGP3YFL055W 1677 nt9.26□□□□□ -0.93
HDA1P53973 PAU21YOR394W 495 nt9.26□□□□□ -0.93
HDA1P53973 PAU22YPL282C 495 nt9.26□□□□□ -0.93
HDA1P53973 OCH1YGL038C 1443 nt9.25□□□□□ -0.93
HDA1P53973 YJR149WYJR149W 1215 nt9.25□□□□□ -0.93
HDA1P53973 GRH1YDR517W 1119 nt9.23□□□□□ -0.93
HDA1P53973 AAC3YBR085W 924 nt9.23□□□□□ -0.93
HDA1P53973 GID7YCL039W 2238 nt9.22□□□□□ -0.93
HDA1P53973 HEL2YDR266C 1920 nt9.21□□□□□ -0.93
HDA1P53973 PDC6YGR087C 1692 nt9.21□□□□□ -0.93
HDA1P53973 YBL095WYBL095W 813 nt9.21□□□□□ -0.94
HDA1P53973 PSD1YNL169C 1503 nt9.21□□□□□ -0.94
HDA1P53973 BXI1YNL305C 894 nt9.2□□□□□ -0.94
HDA1P53973 YER156CYER156C 1017 nt9.19□□□□□ -0.94
HDA1P53973 RRT14YIL127C 621 nt9.19□□□□□ -0.94
HDA1P53973 RPS6AYPL090C 711 nt9.19□□□□□ -0.94
HDA1P53973 RPS6BYBR181C 711 nt9.19□□□□□ -0.94
HDA1P53973 BSP1YPR171W 1731 nt9.19□□□□□ -0.94
HDA1P53973 TMS1YDR105C 1422 nt9.17□□□□□ -0.94
HDA1P53973 ADA2YDR448W 1305 nt9.17□□□□□ -0.94
HDA1P53973 YLR460CYLR460C 1131 nt9.17□□□□□ -0.94
HDA1P53973 SHC1YER096W 1539 nt9.16□□□□□ -0.94
HDA1P53973 YOR343CYOR343C 327 nt9.16□□□□□ -0.94
HDA1P53973 YMC2YBR104W 990 nt9.16□□□□□ -0.94
HDA1P53973 Q0010Q0010 387 nt9.16□□□□□ -0.94
HDA1P53973 YBR056WYBR056W 1506 nt9.15□□□□□ -0.94
HDA1P53973 MEP1YGR121C 1479 nt9.15□□□□□ -0.94
HDA1P53973 AAT1YKL106W 1356 nt9.15□□□□□ -0.94
HDA1P53973 INH1YDL181W 258 nt9.15□□□□□ -0.94
HDA1P53973 CHS7YHR142W 951 nt9.15□□□□□ -0.94
HDA1P53973 MRS4YKR052C 915 nt9.14□□□□□ -0.95
HDA1P53973 FET5YFL041W 1869 nt9.13□□□□□ -0.95
HDA1P53973 YJR154WYJR154W 1041 nt9.13□□□□□ -0.95
HDA1P53973 MTO1YGL236C 2010 nt9.12□□□□□ -0.95
HDA1P53973 tL(UAA)B1tL(UAA)B1 84 nt9.11□□□□□ -0.95
HDA1P53973 tL(UAA)B2tL(UAA)B2 84 nt9.11□□□□□ -0.95
HDA1P53973 tL(UAA)DtL(UAA)D 84 nt9.11□□□□□ -0.95
HDA1P53973 SUP51tL(UAA)J 84 nt9.11□□□□□ -0.95
HDA1P53973 tL(UAA)KtL(UAA)K 84 nt9.11□□□□□ -0.95
HDA1P53973 tL(UAA)LtL(UAA)L 84 nt9.11□□□□□ -0.95
HDA1P53973 tL(UAA)NtL(UAA)N 84 nt9.11□□□□□ -0.95
HDA1P53973 HRA1HRA1 564 nt9.11□□□□□ -0.95
HDA1P53973 YLR072WYLR072W 2082 nt9.11□□□□□ -0.95
HDA1P53973 TPN1YGL186C 1740 nt9.11□□□□□ -0.95
HDA1P53973 snR86snR86 1004 nt9.1□□□□□ -0.95
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms