Protein–RNA interactions for Protein: P53950

VAC7, Vacuolar segregation protein 7, yeastyeast

Predictions only

Length 1,165 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAC7P53950 VMA11YPL234C 495 nt8.4□□□□□ -1.06
VAC7P53950 SDS24YBR214W 1584 nt8.39□□□□□ -1.07
VAC7P53950 YKL133CYKL133C 1392 nt8.39□□□□□ -1.07
VAC7P53950 MDL2YPL270W 2322 nt8.38□□□□□ -1.07
VAC7P53950 YIA6YIL006W 1122 nt8.38□□□□□ -1.07
VAC7P53950 RFC1YOR217W 2586 nt8.38□□□□□ -1.07
VAC7P53950 RIB1YBL033C 1038 nt8.37□□□□□ -1.07
VAC7P53950 CRC1YOR100C 984 nt8.37□□□□□ -1.07
VAC7P53950 MEX67YPL169C 1800 nt8.37□□□□□ -1.07
VAC7P53950 TOK1YJL093C 2076 nt8.37□□□□□ -1.07
VAC7P53950 SER2YGR208W 930 nt8.36□□□□□ -1.07
VAC7P53950 MOB1YIL106W 945 nt8.36□□□□□ -1.07
VAC7P53950 YKL053WYKL053W 375 nt8.36□□□□□ -1.07
VAC7P53950 YKR012CYKR012C 378 nt8.36□□□□□ -1.07
VAC7P53950 REX2YLR059C 810 nt8.36□□□□□ -1.07
VAC7P53950 ODC1YPL134C 933 nt8.36□□□□□ -1.07
VAC7P53950 VBA3YCL069W 1377 nt8.35□□□□□ -1.07
VAC7P53950 SSL2YIL143C 2532 nt8.35□□□□□ -1.07
VAC7P53950 SAN1YDR143C 1833 nt8.34□□□□□ -1.07
VAC7P53950 CYC3YAL039C 810 nt8.34□□□□□ -1.07
VAC7P53950 SRP102YKL154W 735 nt8.33□□□□□ -1.08
VAC7P53950 RSC4YKR008W 1878 nt8.33□□□□□ -1.08
VAC7P53950 ERG6YML008C 1152 nt8.33□□□□□ -1.08
VAC7P53950 snR31snR31 225 nt8.33□□□□□ -1.08
VAC7P53950 CWP2YKL096W-A 279 nt8.32□□□□□ -1.08
VAC7P53950 RPN14YGL004C 1254 nt8.31□□□□□ -1.08
VAC7P53950 SNX3YOR357C 489 nt8.31□□□□□ -1.08
VAC7P53950 RPD3YNL330C 1302 nt8.3□□□□□ -1.08
VAC7P53950 HTS1YPR033C 1641 nt8.3□□□□□ -1.08
VAC7P53950 RIM2YBR192W 1134 nt8.3□□□□□ -1.08
VAC7P53950 SRP54YPR088C 1626 nt8.29□□□□□ -1.08
VAC7P53950 SOD2YHR008C 702 nt8.29□□□□□ -1.08
VAC7P53950 ENO1YGR254W 1314 nt8.28□□□□□ -1.08
VAC7P53950 ERO1YML130C 1692 nt8.27□□□□□ -1.08
VAC7P53950 KGD2YDR148C 1392 nt8.27□□□□□ -1.09
VAC7P53950 MDM35YKL053C-A 261 nt8.25□□□□□ -1.09
VAC7P53950 YMR007WYMR007W 381 nt8.25□□□□□ -1.09
VAC7P53950 POP2YNR052C 1302 nt8.25□□□□□ -1.09
VAC7P53950 YER152W-AYER152W-A 567 nt8.24□□□□□ -1.09
VAC7P53950 DPL1YDR294C 1770 nt8.24□□□□□ -1.09
VAC7P53950 HXT10YFL011W 1641 nt8.23□□□□□ -1.09
VAC7P53950 TGA1tA(UGC)A 73 nt8.23□□□□□ -1.09
VAC7P53950 tA(UGC)EtA(UGC)E 73 nt8.23□□□□□ -1.09
VAC7P53950 tA(UGC)GtA(UGC)G 73 nt8.23□□□□□ -1.09
VAC7P53950 tA(UGC)LtA(UGC)L 73 nt8.23□□□□□ -1.09
VAC7P53950 tA(UGC)OtA(UGC)O 73 nt8.23□□□□□ -1.09
VAC7P53950 YFR020WYFR020W 699 nt8.23□□□□□ -1.09
VAC7P53950 YGR210CYGR210C 1236 nt8.23□□□□□ -1.09
VAC7P53950 YLR280CYLR280C 351 nt8.23□□□□□ -1.09
VAC7P53950 RPC31YNL151C 756 nt8.22□□□□□ -1.09
VAC7P53950 YPT11YNL304W 1254 nt8.22□□□□□ -1.09
VAC7P53950 KRR1YCL059C 951 nt8.21□□□□□ -1.1
VAC7P53950 UFD1YGR048W 1086 nt8.2□□□□□ -1.1
VAC7P53950 YPL108WYPL108W 507 nt8.2□□□□□ -1.1
VAC7P53950 TPN1YGL186C 1740 nt8.2□□□□□ -1.1
VAC7P53950 SBP1YHL034C 885 nt8.17□□□□□ -1.1
VAC7P53950 YJL160CYJL160C 864 nt8.17□□□□□ -1.1
VAC7P53950 NBA1YOL070C 1506 nt8.17□□□□□ -1.1
VAC7P53950 GAS1YMR307W 1680 nt8.17□□□□□ -1.1
VAC7P53950 PTC6YCR079W 1329 nt8.16□□□□□ -1.1
VAC7P53950 LPD1YFL018C 1500 nt8.16□□□□□ -1.1
VAC7P53950 YMR316C-BYMR316C-B 309 nt8.15□□□□□ -1.1
VAC7P53950 YRF1-2YER190W 5046 nt8.15□□□□□ -1.11
VAC7P53950 THI3YDL080C 1830 nt8.15□□□□□ -1.11
VAC7P53950 RCR1YBR005W 642 nt8.14□□□□□ -1.11
VAC7P53950 FRA1YLL029W 2250 nt8.13□□□□□ -1.11
VAC7P53950 FCY1YPR062W 477 nt8.12□□□□□ -1.11
VAC7P53950 FIT1YDR534C 1587 nt8.12□□□□□ -1.11
VAC7P53950 MCM5YLR274W 2328 nt8.11□□□□□ -1.11
VAC7P53950 YMR166CYMR166C 1107 nt8.11□□□□□ -1.11
VAC7P53950 PAU21YOR394W 495 nt8.11□□□□□ -1.11
VAC7P53950 PAU22YPL282C 495 nt8.11□□□□□ -1.11
VAC7P53950 TOM71YHR117W 1920 nt8.1□□□□□ -1.11
VAC7P53950 PET18YCR020C 648 nt8.1□□□□□ -1.11
VAC7P53950 RSM7YJR113C 744 nt8.09□□□□□ -1.11
VAC7P53950 GGA2YHR108W 1758 nt8.09□□□□□ -1.11
VAC7P53950 AGP3YFL055W 1677 nt8.08□□□□□ -1.12
VAC7P53950 EMC3YKL207W 762 nt8.08□□□□□ -1.12
VAC7P53950 BUD20YLR074C 501 nt8.08□□□□□ -1.12
VAC7P53950 MIM1YOL026C 342 nt8.08□□□□□ -1.12
VAC7P53950 LEU4YNL104C 1860 nt8.07□□□□□ -1.12
VAC7P53950 MAS1YLR163C 1389 nt8.07□□□□□ -1.12
VAC7P53950 YMR210WYMR210W 1350 nt8.07□□□□□ -1.12
VAC7P53950 ALR1YOL130W 2580 nt8.06□□□□□ -1.12
VAC7P53950 INH1YDL181W 258 nt8.06□□□□□ -1.12
VAC7P53950 tD(GUC)BtD(GUC)B 72 nt8.06□□□□□ -1.12
VAC7P53950 tD(GUC)DtD(GUC)D 72 nt8.06□□□□□ -1.12
VAC7P53950 tD(GUC)G1tD(GUC)G1 72 nt8.06□□□□□ -1.12
VAC7P53950 tD(GUC)G2tD(GUC)G2 72 nt8.06□□□□□ -1.12
VAC7P53950 tD(GUC)I1tD(GUC)I1 72 nt8.06□□□□□ -1.12
VAC7P53950 tD(GUC)I2tD(GUC)I2 72 nt8.06□□□□□ -1.12
VAC7P53950 tD(GUC)J1tD(GUC)J1 72 nt8.06□□□□□ -1.12
VAC7P53950 tD(GUC)J2tD(GUC)J2 72 nt8.06□□□□□ -1.12
VAC7P53950 tD(GUC)J3tD(GUC)J3 72 nt8.06□□□□□ -1.12
VAC7P53950 tD(GUC)J4tD(GUC)J4 72 nt8.06□□□□□ -1.12
VAC7P53950 tD(GUC)KtD(GUC)K 72 nt8.06□□□□□ -1.12
VAC7P53950 tD(GUC)L1tD(GUC)L1 72 nt8.06□□□□□ -1.12
VAC7P53950 tD(GUC)L2tD(GUC)L2 72 nt8.06□□□□□ -1.12
VAC7P53950 tD(GUC)MtD(GUC)M 72 nt8.06□□□□□ -1.12
VAC7P53950 tD(GUC)OtD(GUC)O 72 nt8.06□□□□□ -1.12
Retrieved 100 of 7,029 protein–RNA pairs in 65.4 ms