Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 NAM8YHR086W 1572 nt6.65□□□□□ -1.34
VPS55P47111 MET1YKR069W 1782 nt6.65□□□□□ -1.34
VPS55P47111 KRR1YCL059C 951 nt6.65□□□□□ -1.34
VPS55P47111 CWP2YKL096W-A 279 nt6.65□□□□□ -1.34
VPS55P47111 ADH3YMR083W 1128 nt6.65□□□□□ -1.34
VPS55P47111 SNX3YOR357C 489 nt6.65□□□□□ -1.34
VPS55P47111 PHB2YGR231C 933 nt6.64□□□□□ -1.35
VPS55P47111 YKR012CYKR012C 378 nt6.64□□□□□ -1.35
VPS55P47111 MOB1YIL106W 945 nt6.63□□□□□ -1.35
VPS55P47111 CRC1YOR100C 984 nt6.63□□□□□ -1.35
VPS55P47111 YCP4YCR004C 744 nt6.62□□□□□ -1.35
VPS55P47111 REX2YLR059C 810 nt6.62□□□□□ -1.35
VPS55P47111 CYC3YAL039C 810 nt6.61□□□□□ -1.35
VPS55P47111 YKL053WYKL053W 375 nt6.61□□□□□ -1.35
VPS55P47111 SRP54YPR088C 1626 nt6.61□□□□□ -1.35
VPS55P47111 SDS24YBR214W 1584 nt6.61□□□□□ -1.35
VPS55P47111 SSL2YIL143C 2532 nt6.6□□□□□ -1.35
VPS55P47111 ENO1YGR254W 1314 nt6.59□□□□□ -1.35
VPS55P47111 ALR1YOL130W 2580 nt6.59□□□□□ -1.36
VPS55P47111 HXT10YFL011W 1641 nt6.58□□□□□ -1.36
VPS55P47111 RPC31YNL151C 756 nt6.58□□□□□ -1.36
VPS55P47111 YPT11YNL304W 1254 nt6.57□□□□□ -1.36
VPS55P47111 SAM50YNL026W 1455 nt6.57□□□□□ -1.36
VPS55P47111 SAN1YDR143C 1833 nt6.57□□□□□ -1.36
VPS55P47111 VBA3YCL069W 1377 nt6.57□□□□□ -1.36
VPS55P47111 TPN1YGL186C 1740 nt6.56□□□□□ -1.36
VPS55P47111 NBA1YOL070C 1506 nt6.56□□□□□ -1.36
VPS55P47111 YIL177CYIL177C 5277 nt6.56□□□□□ -1.36
VPS55P47111 SER2YGR208W 930 nt6.56□□□□□ -1.36
VPS55P47111 SRP102YKL154W 735 nt6.56□□□□□ -1.36
VPS55P47111 RIM2YBR192W 1134 nt6.56□□□□□ -1.36
VPS55P47111 KGD2YDR148C 1392 nt6.56□□□□□ -1.36
VPS55P47111 LYS20YDL182W 1287 nt6.55□□□□□ -1.36
VPS55P47111 UFD1YGR048W 1086 nt6.55□□□□□ -1.36
VPS55P47111 LPD1YFL018C 1500 nt6.55□□□□□ -1.36
VPS55P47111 HTS1YPR033C 1641 nt6.54□□□□□ -1.36
VPS55P47111 SBP1YHL034C 885 nt6.54□□□□□ -1.36
VPS55P47111 YIA6YIL006W 1122 nt6.54□□□□□ -1.36
VPS55P47111 MDM35YKL053C-A 261 nt6.54□□□□□ -1.36
VPS55P47111 SWM1YDR260C 513 nt6.53□□□□□ -1.36
VPS55P47111 YRF1-3YGR296W 5580 nt6.52□□□□□ -1.36
VPS55P47111 YRF1-6YNL339C 5580 nt6.52□□□□□ -1.36
VPS55P47111 YRF1-7YPL283C 5580 nt6.52□□□□□ -1.36
VPS55P47111 FIT1YDR534C 1587 nt6.52□□□□□ -1.36
VPS55P47111 YLR280CYLR280C 351 nt6.52□□□□□ -1.37
VPS55P47111 RIB1YBL033C 1038 nt6.52□□□□□ -1.37
VPS55P47111 GAS1YMR307W 1680 nt6.52□□□□□ -1.37
VPS55P47111 ERO1YML130C 1692 nt6.51□□□□□ -1.37
VPS55P47111 PTC6YCR079W 1329 nt6.5□□□□□ -1.37
VPS55P47111 TOM71YHR117W 1920 nt6.5□□□□□ -1.37
VPS55P47111 DPL1YDR294C 1770 nt6.5□□□□□ -1.37
VPS55P47111 YFR020WYFR020W 699 nt6.5□□□□□ -1.37
VPS55P47111 RSM7YJR113C 744 nt6.5□□□□□ -1.37
VPS55P47111 YMR007WYMR007W 381 nt6.5□□□□□ -1.37
VPS55P47111 YGR210CYGR210C 1236 nt6.48□□□□□ -1.37
VPS55P47111 SOD2YHR008C 702 nt6.48□□□□□ -1.37
VPS55P47111 FRE6YLL051C 2139 nt6.48□□□□□ -1.37
VPS55P47111 RCR1YBR005W 642 nt6.48□□□□□ -1.37
VPS55P47111 AGP3YFL055W 1677 nt6.48□□□□□ -1.37
VPS55P47111 GGA2YHR108W 1758 nt6.47□□□□□ -1.37
VPS55P47111 BSP1YPR171W 1731 nt6.47□□□□□ -1.37
VPS55P47111 YDR467CYDR467C 327 nt6.45□□□□□ -1.38
VPS55P47111 MIM1YOL026C 342 nt6.45□□□□□ -1.38
VPS55P47111 INH1YDL181W 258 nt6.44□□□□□ -1.38
VPS55P47111 TGA1tA(UGC)A 73 nt6.44□□□□□ -1.38
VPS55P47111 tA(UGC)EtA(UGC)E 73 nt6.44□□□□□ -1.38
VPS55P47111 tA(UGC)GtA(UGC)G 73 nt6.44□□□□□ -1.38
VPS55P47111 tA(UGC)LtA(UGC)L 73 nt6.44□□□□□ -1.38
VPS55P47111 tA(UGC)OtA(UGC)O 73 nt6.44□□□□□ -1.38
VPS55P47111 tD(GUC)BtD(GUC)B 72 nt6.44□□□□□ -1.38
VPS55P47111 tD(GUC)DtD(GUC)D 72 nt6.44□□□□□ -1.38
VPS55P47111 tD(GUC)G1tD(GUC)G1 72 nt6.44□□□□□ -1.38
VPS55P47111 tD(GUC)G2tD(GUC)G2 72 nt6.44□□□□□ -1.38
VPS55P47111 tD(GUC)I1tD(GUC)I1 72 nt6.44□□□□□ -1.38
VPS55P47111 tD(GUC)I2tD(GUC)I2 72 nt6.44□□□□□ -1.38
VPS55P47111 tD(GUC)J1tD(GUC)J1 72 nt6.44□□□□□ -1.38
VPS55P47111 tD(GUC)J2tD(GUC)J2 72 nt6.44□□□□□ -1.38
VPS55P47111 tD(GUC)J3tD(GUC)J3 72 nt6.44□□□□□ -1.38
VPS55P47111 tD(GUC)J4tD(GUC)J4 72 nt6.44□□□□□ -1.38
VPS55P47111 tD(GUC)KtD(GUC)K 72 nt6.44□□□□□ -1.38
VPS55P47111 tD(GUC)L1tD(GUC)L1 72 nt6.44□□□□□ -1.38
VPS55P47111 tD(GUC)L2tD(GUC)L2 72 nt6.44□□□□□ -1.38
VPS55P47111 tD(GUC)MtD(GUC)M 72 nt6.44□□□□□ -1.38
VPS55P47111 tD(GUC)OtD(GUC)O 72 nt6.44□□□□□ -1.38
VPS55P47111 GPM1YKL152C 744 nt6.44□□□□□ -1.38
VPS55P47111 YMR316C-BYMR316C-B 309 nt6.44□□□□□ -1.38
VPS55P47111 YLR460CYLR460C 1131 nt6.43□□□□□ -1.38
VPS55P47111 ERG6YML008C 1152 nt6.43□□□□□ -1.38
VPS55P47111 YPL108WYPL108W 507 nt6.43□□□□□ -1.38
VPS55P47111 THI3YDL080C 1830 nt6.43□□□□□ -1.38
VPS55P47111 HBS1YKR084C 1836 nt6.43□□□□□ -1.38
VPS55P47111 LEU4YNL104C 1860 nt6.43□□□□□ -1.38
VPS55P47111 FCY1YPR062W 477 nt6.42□□□□□ -1.38
VPS55P47111 YMR166CYMR166C 1107 nt6.41□□□□□ -1.38
VPS55P47111 FRA1YLL029W 2250 nt6.4□□□□□ -1.38
VPS55P47111 DUS3YLR401C 2007 nt6.39□□□□□ -1.39
VPS55P47111 tE(CUC)DtE(CUC)D 72 nt6.39□□□□□ -1.39
VPS55P47111 tE(CUC)ItE(CUC)I 72 nt6.39□□□□□ -1.39
VPS55P47111 CHS7YHR142W 951 nt6.39□□□□□ -1.39
VPS55P47111 YBL095WYBL095W 813 nt6.39□□□□□ -1.39
Retrieved 100 of 7,029 protein–RNA pairs in 31.7 ms