Protein–RNA interactions for Protein: P29056

BRF1, Transcription factor IIIB 70 kDa subunit, yeastyeast

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRF1P29056 ENT4YLL038C 744 nt8.62□□□□□ -1.03
BRF1P29056 YLR046CYLR046C 813 nt8.61□□□□□ -1.03
BRF1P29056 OPI3YJR073C 621 nt8.6□□□□□ -1.03
BRF1P29056 RPD3YNL330C 1302 nt8.59□□□□□ -1.03
BRF1P29056 KRE1YNL322C 942 nt8.59□□□□□ -1.03
BRF1P29056 LSR1LSR1 1175 nt8.59□□□□□ -1.03
BRF1P29056 LAS17YOR181W 1902 nt8.58□□□□□ -1.04
BRF1P29056 DLD3YEL071W 1491 nt8.58□□□□□ -1.04
BRF1P29056 YCP4YCR004C 744 nt8.58□□□□□ -1.04
BRF1P29056 NAS2YIL007C 663 nt8.57□□□□□ -1.04
BRF1P29056 CDD1YLR245C 429 nt8.57□□□□□ -1.04
BRF1P29056 SAC7YDR389W 1965 nt8.57□□□□□ -1.04
BRF1P29056 MIM1YOL026C 342 nt8.56□□□□□ -1.04
BRF1P29056 AAC3YBR085W 924 nt8.55□□□□□ -1.04
BRF1P29056 STF1YDL130W-A 261 nt8.54□□□□□ -1.04
BRF1P29056 POP2YNR052C 1302 nt8.54□□□□□ -1.04
BRF1P29056 FRT1YOR324C 1809 nt8.53□□□□□ -1.04
BRF1P29056 SPE2YOL052C 1191 nt8.53□□□□□ -1.04
BRF1P29056 ENO2YHR174W 1314 nt8.53□□□□□ -1.04
BRF1P29056 PMA2YPL036W 2844 nt8.53□□□□□ -1.04
BRF1P29056 NDE1YMR145C 1683 nt8.53□□□□□ -1.04
BRF1P29056 KRR1YCL059C 951 nt8.52□□□□□ -1.05
BRF1P29056 tA(AGC)DtA(AGC)D 73 nt8.52□□□□□ -1.05
BRF1P29056 tA(AGC)FtA(AGC)F 73 nt8.52□□□□□ -1.05
BRF1P29056 tA(AGC)GtA(AGC)G 73 nt8.52□□□□□ -1.05
BRF1P29056 tA(AGC)HtA(AGC)H 73 nt8.52□□□□□ -1.05
BRF1P29056 tA(AGC)JtA(AGC)J 73 nt8.52□□□□□ -1.05
BRF1P29056 tA(AGC)K1tA(AGC)K1 73 nt8.52□□□□□ -1.05
BRF1P29056 tA(AGC)K2tA(AGC)K2 73 nt8.52□□□□□ -1.05
BRF1P29056 tA(AGC)LtA(AGC)L 73 nt8.52□□□□□ -1.05
BRF1P29056 tA(AGC)M1tA(AGC)M1 73 nt8.52□□□□□ -1.05
BRF1P29056 tA(AGC)M2tA(AGC)M2 73 nt8.52□□□□□ -1.05
BRF1P29056 tA(AGC)PtA(AGC)P 73 nt8.52□□□□□ -1.05
BRF1P29056 IPL1YPL209C 1104 nt8.52□□□□□ -1.05
BRF1P29056 THP3YPR045C 1413 nt8.52□□□□□ -1.05
BRF1P29056 YNR064CYNR064C 873 nt8.51□□□□□ -1.05
BRF1P29056 AMF1YOR378W 1548 nt8.5□□□□□ -1.05
BRF1P29056 TPC1YGR096W 945 nt8.5□□□□□ -1.05
BRF1P29056 ECM27YJR106W 2178 nt8.5□□□□□ -1.05
BRF1P29056 VMA11YPL234C 495 nt8.5□□□□□ -1.05
BRF1P29056 YER152W-AYER152W-A 567 nt8.49□□□□□ -1.05
BRF1P29056 AGP3YFL055W 1677 nt8.49□□□□□ -1.05
BRF1P29056 YCR025CYCR025C 411 nt8.48□□□□□ -1.05
BRF1P29056 tD(GUC)BtD(GUC)B 72 nt8.48□□□□□ -1.05
BRF1P29056 tD(GUC)DtD(GUC)D 72 nt8.48□□□□□ -1.05
BRF1P29056 tD(GUC)G1tD(GUC)G1 72 nt8.48□□□□□ -1.05
BRF1P29056 tD(GUC)G2tD(GUC)G2 72 nt8.48□□□□□ -1.05
BRF1P29056 tD(GUC)I1tD(GUC)I1 72 nt8.48□□□□□ -1.05
BRF1P29056 tD(GUC)I2tD(GUC)I2 72 nt8.48□□□□□ -1.05
BRF1P29056 tD(GUC)J1tD(GUC)J1 72 nt8.48□□□□□ -1.05
BRF1P29056 tD(GUC)J2tD(GUC)J2 72 nt8.48□□□□□ -1.05
BRF1P29056 tD(GUC)J3tD(GUC)J3 72 nt8.48□□□□□ -1.05
BRF1P29056 tD(GUC)J4tD(GUC)J4 72 nt8.48□□□□□ -1.05
BRF1P29056 tD(GUC)KtD(GUC)K 72 nt8.48□□□□□ -1.05
BRF1P29056 tD(GUC)L1tD(GUC)L1 72 nt8.48□□□□□ -1.05
BRF1P29056 tD(GUC)L2tD(GUC)L2 72 nt8.48□□□□□ -1.05
BRF1P29056 tD(GUC)MtD(GUC)M 72 nt8.48□□□□□ -1.05
BRF1P29056 tD(GUC)OtD(GUC)O 72 nt8.48□□□□□ -1.05
BRF1P29056 DUS3YLR401C 2007 nt8.47□□□□□ -1.05
BRF1P29056 SAM50YNL026W 1455 nt8.47□□□□□ -1.05
BRF1P29056 FSH2YMR222C 672 nt8.47□□□□□ -1.05
BRF1P29056 HBS1YKR084C 1836 nt8.47□□□□□ -1.05
BRF1P29056 ITR2YOL103W 1830 nt8.46□□□□□ -1.06
BRF1P29056 FLX1YIL134W 936 nt8.46□□□□□ -1.06
BRF1P29056 BEM1YBR200W 1656 nt8.46□□□□□ -1.06
BRF1P29056 INH1YDL181W 258 nt8.45□□□□□ -1.06
BRF1P29056 ELO1YJL196C 933 nt8.45□□□□□ -1.06
BRF1P29056 ADH3YMR083W 1128 nt8.45□□□□□ -1.06
BRF1P29056 RPC31YNL151C 756 nt8.45□□□□□ -1.06
BRF1P29056 RIM2YBR192W 1134 nt8.45□□□□□ -1.06
BRF1P29056 GUT1YHL032C 2130 nt8.44□□□□□ -1.06
BRF1P29056 PHB2YGR231C 933 nt8.44□□□□□ -1.06
BRF1P29056 YHR131CYHR131C 2553 nt8.44□□□□□ -1.06
BRF1P29056 GGC1YDL198C 903 nt8.43□□□□□ -1.06
BRF1P29056 LEU2YCL018W 1095 nt8.43□□□□□ -1.06
BRF1P29056 KEL3YPL263C 1956 nt8.42□□□□□ -1.06
BRF1P29056 YJR154WYJR154W 1041 nt8.42□□□□□ -1.06
BRF1P29056 CCR4YAL021C 2514 nt8.41□□□□□ -1.06
BRF1P29056 MOB1YIL106W 945 nt8.41□□□□□ -1.06
BRF1P29056 SNX3YOR357C 489 nt8.41□□□□□ -1.06
BRF1P29056 CTF3YLR381W 2202 nt8.4□□□□□ -1.06
BRF1P29056 YKR012CYKR012C 378 nt8.4□□□□□ -1.06
BRF1P29056 BUD20YLR074C 501 nt8.4□□□□□ -1.06
BRF1P29056 SWT21YNL187W 1074 nt8.4□□□□□ -1.06
BRF1P29056 YIL177CYIL177C 5277 nt8.4□□□□□ -1.07
BRF1P29056 NAM8YHR086W 1572 nt8.39□□□□□ -1.07
BRF1P29056 LYS20YDL182W 1287 nt8.39□□□□□ -1.07
BRF1P29056 DPL1YDR294C 1770 nt8.38□□□□□ -1.07
BRF1P29056 SUV3YPL029W 2214 nt8.36□□□□□ -1.07
BRF1P29056 CYC3YAL039C 810 nt8.36□□□□□ -1.07
BRF1P29056 MET1YKR069W 1782 nt8.35□□□□□ -1.07
BRF1P29056 SWM1YDR260C 513 nt8.35□□□□□ -1.07
BRF1P29056 HAP5YOR358W 729 nt8.35□□□□□ -1.07
BRF1P29056 YMR265CYMR265C 1386 nt8.35□□□□□ -1.07
BRF1P29056 LEU4YNL104C 1860 nt8.34□□□□□ -1.07
BRF1P29056 SER2YGR208W 930 nt8.34□□□□□ -1.07
BRF1P29056 RCR1YBR005W 642 nt8.34□□□□□ -1.07
BRF1P29056 snR31snR31 225 nt8.34□□□□□ -1.07
BRF1P29056 SDS24YBR214W 1584 nt8.34□□□□□ -1.07
BRF1P29056 YKL053WYKL053W 375 nt8.33□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 32.8 ms