Protein–RNA interactions for Protein: P17536

TPM1, Tropomyosin-1, yeastyeast

Known RBP Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TPM1P17536 tA(AGC)JtA(AGC)J 73 nt9.73□□□□□ -0.85
TPM1P17536 tA(AGC)K1tA(AGC)K1 73 nt9.73□□□□□ -0.85
TPM1P17536 tA(AGC)K2tA(AGC)K2 73 nt9.73□□□□□ -0.85
TPM1P17536 tA(AGC)LtA(AGC)L 73 nt9.73□□□□□ -0.85
TPM1P17536 tA(AGC)M1tA(AGC)M1 73 nt9.73□□□□□ -0.85
TPM1P17536 tA(AGC)M2tA(AGC)M2 73 nt9.73□□□□□ -0.85
TPM1P17536 tA(AGC)PtA(AGC)P 73 nt9.73□□□□□ -0.85
TPM1P17536 FLX1YIL134W 936 nt9.73□□□□□ -0.85
TPM1P17536 ACO2YJL200C 2370 nt9.73□□□□□ -0.85
TPM1P17536 CDD1YLR245C 429 nt9.72□□□□□ -0.85
TPM1P17536 ENO1YGR254W 1314 nt9.72□□□□□ -0.85
TPM1P17536 SDS24YBR214W 1584 nt9.71□□□□□ -0.85
TPM1P17536 LEU4YNL104C 1860 nt9.71□□□□□ -0.85
TPM1P17536 PHB2YGR231C 933 nt9.71□□□□□ -0.86
TPM1P17536 CYC3YAL039C 810 nt9.71□□□□□ -0.86
TPM1P17536 GAS1YMR307W 1680 nt9.71□□□□□ -0.86
TPM1P17536 GGA2YHR108W 1758 nt9.7□□□□□ -0.86
TPM1P17536 AGP3YFL055W 1677 nt9.69□□□□□ -0.86
TPM1P17536 RSM7YJR113C 744 nt9.69□□□□□ -0.86
TPM1P17536 PTC6YCR079W 1329 nt9.68□□□□□ -0.86
TPM1P17536 LYS20YDL182W 1287 nt9.68□□□□□ -0.86
TPM1P17536 GPM1YKL152C 744 nt9.68□□□□□ -0.86
TPM1P17536 ILV2YMR108W 2064 nt9.68□□□□□ -0.86
TPM1P17536 DTR1YBR180W 1719 nt9.68□□□□□ -0.86
TPM1P17536 HEM14YER014W 1620 nt9.67□□□□□ -0.86
TPM1P17536 YRF1-3YGR296W 5580 nt9.65□□□□□ -0.86
TPM1P17536 YRF1-6YNL339C 5580 nt9.65□□□□□ -0.86
TPM1P17536 YRF1-7YPL283C 5580 nt9.65□□□□□ -0.86
TPM1P17536 VBA3YCL069W 1377 nt9.65□□□□□ -0.86
TPM1P17536 PUP1YOR157C 786 nt9.65□□□□□ -0.86
TPM1P17536 YBL095WYBL095W 813 nt9.64□□□□□ -0.87
TPM1P17536 tE(CUC)DtE(CUC)D 72 nt9.62□□□□□ -0.87
TPM1P17536 tE(CUC)ItE(CUC)I 72 nt9.62□□□□□ -0.87
TPM1P17536 SRP102YKL154W 735 nt9.62□□□□□ -0.87
TPM1P17536 YMC2YBR104W 990 nt9.62□□□□□ -0.87
TPM1P17536 YIL177CYIL177C 5277 nt9.62□□□□□ -0.87
TPM1P17536 YHL008CYHL008C 1884 nt9.59□□□□□ -0.87
TPM1P17536 THI3YDL080C 1830 nt9.59□□□□□ -0.87
TPM1P17536 YLR280CYLR280C 351 nt9.59□□□□□ -0.87
TPM1P17536 YMR316C-BYMR316C-B 309 nt9.59□□□□□ -0.87
TPM1P17536 YDR510C-AYDR510C-A 117 nt9.58□□□□□ -0.88
TPM1P17536 YLR460CYLR460C 1131 nt9.58□□□□□ -0.88
TPM1P17536 NPP2YEL016C 1482 nt9.57□□□□□ -0.88
TPM1P17536 HTS1YPR033C 1641 nt9.56□□□□□ -0.88
TPM1P17536 YFR020WYFR020W 699 nt9.56□□□□□ -0.88
TPM1P17536 SER2YGR208W 930 nt9.56□□□□□ -0.88
TPM1P17536 MRS4YKR052C 915 nt9.56□□□□□ -0.88
TPM1P17536 ERO1YML130C 1692 nt9.55□□□□□ -0.88
TPM1P17536 GTB1YDR221W 2109 nt9.55□□□□□ -0.88
TPM1P17536 SLG1YOR008C 1137 nt9.55□□□□□ -0.88
TPM1P17536 YCP4YCR004C 744 nt9.54□□□□□ -0.88
TPM1P17536 NBA1YOL070C 1506 nt9.54□□□□□ -0.88
TPM1P17536 HMG2YLR450W 3138 nt9.54□□□□□ -0.88
TPM1P17536 MAS1YLR163C 1389 nt9.53□□□□□ -0.88
TPM1P17536 YIR035CYIR035C 765 nt9.52□□□□□ -0.89
TPM1P17536 TMS1YDR105C 1422 nt9.51□□□□□ -0.89
TPM1P17536 AAC3YBR085W 924 nt9.51□□□□□ -0.89
TPM1P17536 YJL009WYJL009W 327 nt9.5□□□□□ -0.89
TPM1P17536 SAM50YNL026W 1455 nt9.49□□□□□ -0.89
TPM1P17536 CHS7YHR142W 951 nt9.49□□□□□ -0.89
TPM1P17536 AAT1YKL106W 1356 nt9.49□□□□□ -0.89
TPM1P17536 TPN1YGL186C 1740 nt9.48□□□□□ -0.89
TPM1P17536 OLA1YBR025C 1185 nt9.48□□□□□ -0.89
TPM1P17536 YGR210CYGR210C 1236 nt9.47□□□□□ -0.89
TPM1P17536 MTO1YGL236C 2010 nt9.46□□□□□ -0.89
TPM1P17536 RSC4YKR008W 1878 nt9.45□□□□□ -0.9
TPM1P17536 TGA1tA(UGC)A 73 nt9.45□□□□□ -0.9
TPM1P17536 tA(UGC)EtA(UGC)E 73 nt9.45□□□□□ -0.9
TPM1P17536 tA(UGC)GtA(UGC)G 73 nt9.45□□□□□ -0.9
TPM1P17536 tA(UGC)LtA(UGC)L 73 nt9.45□□□□□ -0.9
TPM1P17536 tA(UGC)OtA(UGC)O 73 nt9.45□□□□□ -0.9
TPM1P17536 YJR149WYJR149W 1215 nt9.45□□□□□ -0.9
TPM1P17536 BUB2YMR055C 921 nt9.45□□□□□ -0.9
TPM1P17536 FCY1YPR062W 477 nt9.45□□□□□ -0.9
TPM1P17536 YMR007WYMR007W 381 nt9.44□□□□□ -0.9
TPM1P17536 RCR1YBR005W 642 nt9.44□□□□□ -0.9
TPM1P17536 TPO4YOR273C 1980 nt9.43□□□□□ -0.9
TPM1P17536 YMR166CYMR166C 1107 nt9.42□□□□□ -0.9
TPM1P17536 EMC3YKL207W 762 nt9.41□□□□□ -0.9
TPM1P17536 YPL108WYPL108W 507 nt9.41□□□□□ -0.9
TPM1P17536 TOK1YJL093C 2076 nt9.41□□□□□ -0.9
TPM1P17536 TRP2YER090W 1524 nt9.4□□□□□ -0.91
TPM1P17536 THI6YPL214C 1623 nt9.39□□□□□ -0.91
TPM1P17536 FET5YFL041W 1869 nt9.39□□□□□ -0.91
TPM1P17536 SWM1YDR260C 513 nt9.38□□□□□ -0.91
TPM1P17536 YOR072WYOR072W 315 nt9.38□□□□□ -0.91
TPM1P17536 snR86snR86 1004 nt9.37□□□□□ -0.91
TPM1P17536 YIA6YIL006W 1122 nt9.37□□□□□ -0.91
TPM1P17536 LSP1YPL004C 1026 nt9.37□□□□□ -0.91
TPM1P17536 MET22YOL064C 1074 nt9.36□□□□□ -0.91
TPM1P17536 tD(GUC)BtD(GUC)B 72 nt9.35□□□□□ -0.91
TPM1P17536 tD(GUC)DtD(GUC)D 72 nt9.35□□□□□ -0.91
TPM1P17536 tD(GUC)G1tD(GUC)G1 72 nt9.35□□□□□ -0.91
TPM1P17536 tD(GUC)G2tD(GUC)G2 72 nt9.35□□□□□ -0.91
TPM1P17536 tD(GUC)I1tD(GUC)I1 72 nt9.35□□□□□ -0.91
TPM1P17536 tD(GUC)I2tD(GUC)I2 72 nt9.35□□□□□ -0.91
TPM1P17536 tD(GUC)J1tD(GUC)J1 72 nt9.35□□□□□ -0.91
TPM1P17536 tD(GUC)J2tD(GUC)J2 72 nt9.35□□□□□ -0.91
TPM1P17536 tD(GUC)J3tD(GUC)J3 72 nt9.35□□□□□ -0.91
TPM1P17536 tD(GUC)J4tD(GUC)J4 72 nt9.35□□□□□ -0.91
Retrieved 100 of 7,029 protein–RNA pairs in 27.9 ms