Protein–RNA interactions for Protein: P0C2J7

TY4B-H, Transposon Ty4-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-HP0C2J7 YOR325WYOR325W 474 nt10.91□□□□□ -0.66
TY4B-HP0C2J7 MET1YKR069W 1782 nt10.91□□□□□ -0.66
TY4B-HP0C2J7 YKL053WYKL053W 375 nt10.91□□□□□ -0.66
TY4B-HP0C2J7 CYT2YKL087C 675 nt10.91□□□□□ -0.66
TY4B-HP0C2J7 ITR2YOL103W 1830 nt10.9□□□□□ -0.66
TY4B-HP0C2J7 MRP1YDR347W 966 nt10.88□□□□□ -0.67
TY4B-HP0C2J7 SRP54YPR088C 1626 nt10.88□□□□□ -0.67
TY4B-HP0C2J7 MCH5YOR306C 1566 nt10.88□□□□□ -0.67
TY4B-HP0C2J7 ENT4YLL038C 744 nt10.87□□□□□ -0.67
TY4B-HP0C2J7 YIL100C-AYIL100C-A 339 nt10.85□□□□□ -0.67
TY4B-HP0C2J7 FUS3YBL016W 1062 nt10.85□□□□□ -0.67
TY4B-HP0C2J7 DLD3YEL071W 1491 nt10.84□□□□□ -0.67
TY4B-HP0C2J7 LSR1LSR1 1175 nt10.84□□□□□ -0.67
TY4B-HP0C2J7 HAP5YOR358W 729 nt10.81□□□□□ -0.68
TY4B-HP0C2J7 RDN25-1RDN25-1 3396 nt10.79□□□□□ -0.68
TY4B-HP0C2J7 RDN25-2RDN25-2 3396 nt10.79□□□□□ -0.68
TY4B-HP0C2J7 YMR265CYMR265C 1386 nt10.79□□□□□ -0.68
TY4B-HP0C2J7 KEL3YPL263C 1956 nt10.78□□□□□ -0.68
TY4B-HP0C2J7 GDH1YOR375C 1365 nt10.78□□□□□ -0.68
TY4B-HP0C2J7 RPC82YPR190C 1965 nt10.77□□□□□ -0.69
TY4B-HP0C2J7 CRC1YOR100C 984 nt10.77□□□□□ -0.69
TY4B-HP0C2J7 YER156CYER156C 1017 nt10.75□□□□□ -0.69
TY4B-HP0C2J7 SAN1YDR143C 1833 nt10.75□□□□□ -0.69
TY4B-HP0C2J7 NUP53YMR153W 1428 nt10.75□□□□□ -0.69
TY4B-HP0C2J7 YPT11YNL304W 1254 nt10.74□□□□□ -0.69
TY4B-HP0C2J7 ILV3YJR016C 1758 nt10.74□□□□□ -0.69
TY4B-HP0C2J7 PTC6YCR079W 1329 nt10.72□□□□□ -0.69
TY4B-HP0C2J7 YJL043WYJL043W 774 nt10.7□□□□□ -0.7
TY4B-HP0C2J7 snR31snR31 225 nt10.7□□□□□ -0.7
TY4B-HP0C2J7 YLR358CYLR358C 564 nt10.69□□□□□ -0.7
TY4B-HP0C2J7 BXI1YNL305C 894 nt10.68□□□□□ -0.7
TY4B-HP0C2J7 TAD2YJL035C 753 nt10.68□□□□□ -0.7
TY4B-HP0C2J7 TDH1YJL052W 999 nt10.68□□□□□ -0.7
TY4B-HP0C2J7 RIM2YBR192W 1134 nt10.68□□□□□ -0.7
TY4B-HP0C2J7 MFT1YML062C 1179 nt10.66□□□□□ -0.7
TY4B-HP0C2J7 PET494YNR045W 1470 nt10.66□□□□□ -0.7
TY4B-HP0C2J7 MRS6YOR370C 1812 nt10.65□□□□□ -0.7
TY4B-HP0C2J7 INA1YLR413W 2028 nt10.65□□□□□ -0.7
TY4B-HP0C2J7 RPS6AYPL090C 711 nt10.65□□□□□ -0.71
TY4B-HP0C2J7 RPS6BYBR181C 711 nt10.65□□□□□ -0.71
TY4B-HP0C2J7 HAC1YFL031W 717 nt10.64□□□□□ -0.71
TY4B-HP0C2J7 SBP1YHL034C 885 nt10.64□□□□□ -0.71
TY4B-HP0C2J7 MET22YOL064C 1074 nt10.64□□□□□ -0.71
TY4B-HP0C2J7 GID8YMR135C 1368 nt10.64□□□□□ -0.71
TY4B-HP0C2J7 SNX3YOR357C 489 nt10.63□□□□□ -0.71
TY4B-HP0C2J7 KGD2YDR148C 1392 nt10.61□□□□□ -0.71
TY4B-HP0C2J7 YKL133CYKL133C 1392 nt10.61□□□□□ -0.71
TY4B-HP0C2J7 RPN14YGL004C 1254 nt10.6□□□□□ -0.71
TY4B-HP0C2J7 YHR219WYHR219W 1875 nt10.59□□□□□ -0.71
TY4B-HP0C2J7 YIL168WYIL168W 384 nt10.59□□□□□ -0.71
TY4B-HP0C2J7 NCA3YJL116C 1014 nt10.59□□□□□ -0.71
TY4B-HP0C2J7 ARO8YGL202W 1503 nt10.58□□□□□ -0.72
TY4B-HP0C2J7 OCH1YGL038C 1443 nt10.58□□□□□ -0.72
TY4B-HP0C2J7 YPR084WYPR084W 1371 nt10.58□□□□□ -0.72
TY4B-HP0C2J7 GAS1YMR307W 1680 nt10.56□□□□□ -0.72
TY4B-HP0C2J7 CHS7YHR142W 951 nt10.55□□□□□ -0.72
TY4B-HP0C2J7 KES1YPL145C 1305 nt10.54□□□□□ -0.72
TY4B-HP0C2J7 SHC1YER096W 1539 nt10.54□□□□□ -0.72
TY4B-HP0C2J7 CAK1YFL029C 1107 nt10.54□□□□□ -0.72
TY4B-HP0C2J7 YFR020WYFR020W 699 nt10.54□□□□□ -0.72
TY4B-HP0C2J7 RRT6YGL146C 936 nt10.53□□□□□ -0.72
TY4B-HP0C2J7 COQ8YGL119W 1506 nt10.53□□□□□ -0.72
TY4B-HP0C2J7 COS10YNR075W 1125 nt10.52□□□□□ -0.73
TY4B-HP0C2J7 UME6YDR207C 2511 nt10.52□□□□□ -0.73
TY4B-HP0C2J7 RSM7YJR113C 744 nt10.51□□□□□ -0.73
TY4B-HP0C2J7 RRT14YIL127C 621 nt10.51□□□□□ -0.73
TY4B-HP0C2J7 YMR316C-BYMR316C-B 309 nt10.49□□□□□ -0.73
TY4B-HP0C2J7 APT1YML022W 564 nt10.46□□□□□ -0.74
TY4B-HP0C2J7 THI3YDL080C 1830 nt10.45□□□□□ -0.74
TY4B-HP0C2J7 YLR460CYLR460C 1131 nt10.44□□□□□ -0.74
TY4B-HP0C2J7 SPT20YOL148C 1815 nt10.44□□□□□ -0.74
TY4B-HP0C2J7 PDC6YGR087C 1692 nt10.41□□□□□ -0.74
TY4B-HP0C2J7 MUP1YGR055W 1725 nt10.41□□□□□ -0.74
TY4B-HP0C2J7 PIH1YHR034C 1035 nt10.41□□□□□ -0.74
TY4B-HP0C2J7 YML079WYML079W 606 nt10.4□□□□□ -0.74
TY4B-HP0C2J7 RNA170RNA170 169 nt10.4□□□□□ -0.75
TY4B-HP0C2J7 RPR1RPR1 369 nt10.4□□□□□ -0.75
TY4B-HP0C2J7 RHO1YPR165W 630 nt10.39□□□□□ -0.75
TY4B-HP0C2J7 SRY1YKL218C 981 nt10.38□□□□□ -0.75
TY4B-HP0C2J7 SGA1YIL099W 1650 nt10.38□□□□□ -0.75
TY4B-HP0C2J7 RPD3YNL330C 1302 nt10.37□□□□□ -0.75
TY4B-HP0C2J7 SPR1YOR190W 1338 nt10.37□□□□□ -0.75
TY4B-HP0C2J7 YPT31YER031C 672 nt10.37□□□□□ -0.75
TY4B-HP0C2J7 ZAP1YJL056C 2643 nt10.36□□□□□ -0.75
TY4B-HP0C2J7 PUP2YGR253C 783 nt10.35□□□□□ -0.75
TY4B-HP0C2J7 AAC3YBR085W 924 nt10.35□□□□□ -0.75
TY4B-HP0C2J7 HOL1YNR055C 1761 nt10.35□□□□□ -0.75
TY4B-HP0C2J7 URA1YKL216W 945 nt10.35□□□□□ -0.75
TY4B-HP0C2J7 PUP3YER094C 618 nt10.33□□□□□ -0.76
TY4B-HP0C2J7 RPC31YNL151C 756 nt10.32□□□□□ -0.76
TY4B-HP0C2J7 GPM1YKL152C 744 nt10.31□□□□□ -0.76
TY4B-HP0C2J7 UGP1YKL035W 1500 nt10.31□□□□□ -0.76
TY4B-HP0C2J7 GGA2YHR108W 1758 nt10.3□□□□□ -0.76
TY4B-HP0C2J7 SSL2YIL143C 2532 nt10.3□□□□□ -0.76
TY4B-HP0C2J7 YDR476CYDR476C 675 nt10.3□□□□□ -0.76
TY4B-HP0C2J7 CYS3YAL012W 1185 nt10.3□□□□□ -0.76
TY4B-HP0C2J7 CWP2YKL096W-A 279 nt10.29□□□□□ -0.76
TY4B-HP0C2J7 YJL144WYJL144W 315 nt10.28□□□□□ -0.76
TY4B-HP0C2J7 ATP23YNR020C 813 nt10.27□□□□□ -0.77
TY4B-HP0C2J7 YBL095WYBL095W 813 nt10.27□□□□□ -0.77
Retrieved 100 of 7,029 protein–RNA pairs in 30.3 ms