Protein–RNA interactions for Protein: P08425

MSF1, Phenylalanine--tRNA ligase, mitochondrial, yeastyeast

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSF1P08425 tA(UGC)LtA(UGC)L 73 nt8.41□□□□□ -1.06
MSF1P08425 tA(UGC)OtA(UGC)O 73 nt8.41□□□□□ -1.06
MSF1P08425 HIS2YFR025C 1008 nt8.41□□□□□ -1.06
MSF1P08425 SSL2YIL143C 2532 nt8.41□□□□□ -1.06
MSF1P08425 ERO1YML130C 1692 nt8.4□□□□□ -1.06
MSF1P08425 YAL016C-AYAL016C-A 315 nt8.4□□□□□ -1.06
MSF1P08425 HRA1HRA1 564 nt8.4□□□□□ -1.06
MSF1P08425 YLR280CYLR280C 351 nt8.4□□□□□ -1.06
MSF1P08425 VBA3YCL069W 1377 nt8.39□□□□□ -1.07
MSF1P08425 LSR1LSR1 1175 nt8.39□□□□□ -1.07
MSF1P08425 RFC1YOR217W 2586 nt8.38□□□□□ -1.07
MSF1P08425 GRH1YDR517W 1119 nt8.38□□□□□ -1.07
MSF1P08425 SWT21YNL187W 1074 nt8.38□□□□□ -1.07
MSF1P08425 KEL3YPL263C 1956 nt8.37□□□□□ -1.07
MSF1P08425 FCY1YPR062W 477 nt8.37□□□□□ -1.07
MSF1P08425 SFL1YOR140W 2301 nt8.35□□□□□ -1.07
MSF1P08425 ELO1YJL196C 933 nt8.35□□□□□ -1.07
MSF1P08425 YPL108WYPL108W 507 nt8.35□□□□□ -1.07
MSF1P08425 REX2YLR059C 810 nt8.34□□□□□ -1.07
MSF1P08425 ODC1YPL134C 933 nt8.34□□□□□ -1.07
MSF1P08425 YJL160CYJL160C 864 nt8.33□□□□□ -1.08
MSF1P08425 EMC3YKL207W 762 nt8.33□□□□□ -1.08
MSF1P08425 SUV3YPL029W 2214 nt8.32□□□□□ -1.08
MSF1P08425 CWP2YKL096W-A 279 nt8.32□□□□□ -1.08
MSF1P08425 YOR268CYOR268C 399 nt8.32□□□□□ -1.08
MSF1P08425 VMA11YPL234C 495 nt8.31□□□□□ -1.08
MSF1P08425 MET1YKR069W 1782 nt8.3□□□□□ -1.08
MSF1P08425 MCM5YLR274W 2328 nt8.3□□□□□ -1.08
MSF1P08425 MRP1YDR347W 966 nt8.29□□□□□ -1.08
MSF1P08425 YMR209CYMR209C 1374 nt8.29□□□□□ -1.08
MSF1P08425 GAL2YLR081W 1725 nt8.29□□□□□ -1.08
MSF1P08425 YFR020WYFR020W 699 nt8.28□□□□□ -1.08
MSF1P08425 YKL053WYKL053W 375 nt8.28□□□□□ -1.08
MSF1P08425 snR31snR31 225 nt8.28□□□□□ -1.08
MSF1P08425 RIM2YBR192W 1134 nt8.28□□□□□ -1.08
MSF1P08425 SRP54YPR088C 1626 nt8.28□□□□□ -1.08
MSF1P08425 RPD3YNL330C 1302 nt8.28□□□□□ -1.08
MSF1P08425 YMR210WYMR210W 1350 nt8.27□□□□□ -1.09
MSF1P08425 YMR265CYMR265C 1386 nt8.27□□□□□ -1.09
MSF1P08425 RSC4YKR008W 1878 nt8.27□□□□□ -1.09
MSF1P08425 HAP5YOR358W 729 nt8.25□□□□□ -1.09
MSF1P08425 EDC2YER035W 438 nt8.24□□□□□ -1.09
MSF1P08425 SNX3YOR357C 489 nt8.24□□□□□ -1.09
MSF1P08425 MFG1YDL233W 1377 nt8.23□□□□□ -1.09
MSF1P08425 DPL1YDR294C 1770 nt8.23□□□□□ -1.09
MSF1P08425 YPT11YNL304W 1254 nt8.23□□□□□ -1.09
MSF1P08425 CRC1YOR100C 984 nt8.23□□□□□ -1.09
MSF1P08425 SAN1YDR143C 1833 nt8.22□□□□□ -1.09
MSF1P08425 RPN14YGL004C 1254 nt8.22□□□□□ -1.09
MSF1P08425 MDM35YKL053C-A 261 nt8.21□□□□□ -1.1
MSF1P08425 GDH1YOR375C 1365 nt8.21□□□□□ -1.1
MSF1P08425 YDR510C-AYDR510C-A 117 nt8.2□□□□□ -1.1
MSF1P08425 RPC31YNL151C 756 nt8.2□□□□□ -1.1
MSF1P08425 LSP1YPL004C 1026 nt8.2□□□□□ -1.1
MSF1P08425 DMA2YNL116W 1569 nt8.19□□□□□ -1.1
MSF1P08425 YMR166CYMR166C 1107 nt8.19□□□□□ -1.1
MSF1P08425 GTB1YDR221W 2109 nt8.18□□□□□ -1.1
MSF1P08425 tL(UAA)B1tL(UAA)B1 84 nt8.18□□□□□ -1.1
MSF1P08425 tL(UAA)B2tL(UAA)B2 84 nt8.18□□□□□ -1.1
MSF1P08425 tL(UAA)DtL(UAA)D 84 nt8.18□□□□□ -1.1
MSF1P08425 SUP51tL(UAA)J 84 nt8.18□□□□□ -1.1
MSF1P08425 tL(UAA)KtL(UAA)K 84 nt8.18□□□□□ -1.1
MSF1P08425 tL(UAA)LtL(UAA)L 84 nt8.18□□□□□ -1.1
MSF1P08425 tL(UAA)NtL(UAA)N 84 nt8.18□□□□□ -1.1
MSF1P08425 PET18YCR020C 648 nt8.17□□□□□ -1.1
MSF1P08425 ADA2YDR448W 1305 nt8.17□□□□□ -1.1
MSF1P08425 MAS1YLR163C 1389 nt8.17□□□□□ -1.1
MSF1P08425 YHR218WYHR218W 1812 nt8.17□□□□□ -1.1
MSF1P08425 KGD2YDR148C 1392 nt8.15□□□□□ -1.1
MSF1P08425 RSM7YJR113C 744 nt8.15□□□□□ -1.1
MSF1P08425 KRR1YCL059C 951 nt8.14□□□□□ -1.11
MSF1P08425 RRT14YIL127C 621 nt8.14□□□□□ -1.11
MSF1P08425 KAE1YKR038C 1161 nt8.14□□□□□ -1.11
MSF1P08425 TPO4YOR273C 1980 nt8.13□□□□□ -1.11
MSF1P08425 UTR5YEL035C 501 nt8.13□□□□□ -1.11
MSF1P08425 TAD2YJL035C 753 nt8.13□□□□□ -1.11
MSF1P08425 MFT1YML062C 1179 nt8.13□□□□□ -1.11
MSF1P08425 GAS1YMR307W 1680 nt8.12□□□□□ -1.11
MSF1P08425 HXT10YFL011W 1641 nt8.12□□□□□ -1.11
MSF1P08425 YER156CYER156C 1017 nt8.12□□□□□ -1.11
MSF1P08425 YMR206WYMR206W 942 nt8.12□□□□□ -1.11
MSF1P08425 TOK1YJL093C 2076 nt8.12□□□□□ -1.11
MSF1P08425 PTC6YCR079W 1329 nt8.11□□□□□ -1.11
MSF1P08425 HOG1YLR113W 1308 nt8.11□□□□□ -1.11
MSF1P08425 HMG2YLR450W 3138 nt8.11□□□□□ -1.11
MSF1P08425 MAE1YKL029C 2010 nt8.11□□□□□ -1.11
MSF1P08425 URA8YJR103W 1737 nt8.1□□□□□ -1.11
MSF1P08425 CAK1YFL029C 1107 nt8.1□□□□□ -1.11
MSF1P08425 PSD1YNL169C 1503 nt8.09□□□□□ -1.11
MSF1P08425 LEU4YNL104C 1860 nt8.09□□□□□ -1.11
MSF1P08425 YJR149WYJR149W 1215 nt8.09□□□□□ -1.11
MSF1P08425 SBP1YHL034C 885 nt8.08□□□□□ -1.12
MSF1P08425 ELP4YPL101W 1371 nt8.08□□□□□ -1.12
MSF1P08425 TOS1YBR162C 1368 nt8.08□□□□□ -1.12
MSF1P08425 OCH1YGL038C 1443 nt8.07□□□□□ -1.12
MSF1P08425 AGP3YFL055W 1677 nt8.07□□□□□ -1.12
MSF1P08425 YLR460CYLR460C 1131 nt8.06□□□□□ -1.12
MSF1P08425 MET22YOL064C 1074 nt8.05□□□□□ -1.12
MSF1P08425 THI3YDL080C 1830 nt8.04□□□□□ -1.12
MSF1P08425 tE(CUC)DtE(CUC)D 72 nt8.04□□□□□ -1.12
Retrieved 100 of 7,029 protein–RNA pairs in 29.9 ms