Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPDEFO95238 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
SPDEFO95238 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPDEFO95238 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SPDEFO95238 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPDEFO95238 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.72■■□□□ 1.07
SPDEFO95238 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPDEFO95238 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPDEFO95238 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
SPDEFO95238 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPDEFO95238 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPDEFO95238 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.71■■□□□ 1.07
SPDEFO95238 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPDEFO95238 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SPDEFO95238 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
SPDEFO95238 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SPDEFO95238 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPDEFO95238 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPDEFO95238 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPDEFO95238 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
SPDEFO95238 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.69■■□□□ 1.06
SPDEFO95238 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SPDEFO95238 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SPDEFO95238 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPDEFO95238 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPDEFO95238 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPDEFO95238 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SPDEFO95238 RARRES2P7-201ENST00000567349 469 ntBASIC21.67■■□□□ 1.06
SPDEFO95238 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPDEFO95238 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPDEFO95238 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SPDEFO95238 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPDEFO95238 AL133380.1-201ENST00000506013 324 ntBASIC21.66■■□□□ 1.06
SPDEFO95238 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SPDEFO95238 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPDEFO95238 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPDEFO95238 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPDEFO95238 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPDEFO95238 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPDEFO95238 DRD5P2-201ENST00000421395 2012 ntBASIC21.63■■□□□ 1.05
SPDEFO95238 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.63■■□□□ 1.05
SPDEFO95238 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPDEFO95238 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.62■■□□□ 1.05
SPDEFO95238 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.62■■□□□ 1.05
SPDEFO95238 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
SPDEFO95238 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPDEFO95238 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPDEFO95238 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SPDEFO95238 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SPDEFO95238 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SPDEFO95238 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SPDEFO95238 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SPDEFO95238 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SPDEFO95238 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SPDEFO95238 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SPDEFO95238 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SPDEFO95238 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SPDEFO95238 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SPDEFO95238 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SPDEFO95238 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
SPDEFO95238 SETD8P1-201ENST00000623146 1180 ntBASIC21.58■■□□□ 1.05
SPDEFO95238 WASH5P-204ENST00000632292 975 ntBASIC21.58■■□□□ 1.05
SPDEFO95238 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SPDEFO95238 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SPDEFO95238 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SPDEFO95238 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SPDEFO95238 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPDEFO95238 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SPDEFO95238 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SPDEFO95238 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SPDEFO95238 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SPDEFO95238 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPDEFO95238 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SPDEFO95238 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPDEFO95238 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPDEFO95238 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.53■■□□□ 1.04
SPDEFO95238 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPDEFO95238 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPDEFO95238 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SPDEFO95238 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPDEFO95238 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SPDEFO95238 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPDEFO95238 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPDEFO95238 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.52■■□□□ 1.03
SPDEFO95238 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPDEFO95238 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPDEFO95238 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SPDEFO95238 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPDEFO95238 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SPDEFO95238 AL449106.1-201ENST00000608517 1980 ntBASIC21.5■■□□□ 1.03
SPDEFO95238 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SPDEFO95238 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SPDEFO95238 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SPDEFO95238 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SPDEFO95238 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SPDEFO95238 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.48■■□□□ 1.03
SPDEFO95238 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SPDEFO95238 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SPDEFO95238 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.48■■□□□ 1.03
SPDEFO95238 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms