Protein–RNA interactions for Protein: O13527

TY1B-A, Truncated transposon Ty1-A Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-AO13527 OPI10YOL032W 741 nt9.41□□□□□ -0.9
TY1B-AO13527 KEL3YPL263C 1956 nt9.4□□□□□ -0.9
TY1B-AO13527 MDL2YPL270W 2322 nt9.38□□□□□ -0.91
TY1B-AO13527 ELO1YJL196C 933 nt9.38□□□□□ -0.91
TY1B-AO13527 YDR306CYDR306C 1437 nt9.38□□□□□ -0.91
TY1B-AO13527 FCY1YPR062W 477 nt9.37□□□□□ -0.91
TY1B-AO13527 DUR3YHL016C 2208 nt9.37□□□□□ -0.91
TY1B-AO13527 SDS24YBR214W 1584 nt9.37□□□□□ -0.91
TY1B-AO13527 YLR280CYLR280C 351 nt9.36□□□□□ -0.91
TY1B-AO13527 YLR173WYLR173W 1827 nt9.35□□□□□ -0.91
TY1B-AO13527 YGR210CYGR210C 1236 nt9.35□□□□□ -0.91
TY1B-AO13527 SRP102YKL154W 735 nt9.35□□□□□ -0.91
TY1B-AO13527 snR31snR31 225 nt9.35□□□□□ -0.91
TY1B-AO13527 TGA1tA(UGC)A 73 nt9.34□□□□□ -0.91
TY1B-AO13527 tA(UGC)EtA(UGC)E 73 nt9.34□□□□□ -0.91
TY1B-AO13527 tA(UGC)GtA(UGC)G 73 nt9.34□□□□□ -0.91
TY1B-AO13527 tA(UGC)LtA(UGC)L 73 nt9.34□□□□□ -0.91
TY1B-AO13527 tA(UGC)OtA(UGC)O 73 nt9.34□□□□□ -0.91
TY1B-AO13527 ERO1YML130C 1692 nt9.33□□□□□ -0.92
TY1B-AO13527 REX2YLR059C 810 nt9.31□□□□□ -0.92
TY1B-AO13527 SWT21YNL187W 1074 nt9.31□□□□□ -0.92
TY1B-AO13527 RIM2YBR192W 1134 nt9.3□□□□□ -0.92
TY1B-AO13527 VBA3YCL069W 1377 nt9.29□□□□□ -0.92
TY1B-AO13527 RPN14YGL004C 1254 nt9.29□□□□□ -0.92
TY1B-AO13527 NSG2YNL156C 900 nt9.29□□□□□ -0.92
TY1B-AO13527 THI6YPL214C 1623 nt9.29□□□□□ -0.92
TY1B-AO13527 SRP54YPR088C 1626 nt9.28□□□□□ -0.92
TY1B-AO13527 MET1YKR069W 1782 nt9.27□□□□□ -0.92
TY1B-AO13527 ITR2YOL103W 1830 nt9.27□□□□□ -0.93
TY1B-AO13527 DLD3YEL071W 1491 nt9.27□□□□□ -0.93
TY1B-AO13527 YKL053WYKL053W 375 nt9.26□□□□□ -0.93
TY1B-AO13527 YOR343CYOR343C 327 nt9.25□□□□□ -0.93
TY1B-AO13527 HAP5YOR358W 729 nt9.25□□□□□ -0.93
TY1B-AO13527 ADE5,7YGL234W 2409 nt9.25□□□□□ -0.93
TY1B-AO13527 HRA1HRA1 564 nt9.24□□□□□ -0.93
TY1B-AO13527 PUS7YOR243C 2031 nt9.24□□□□□ -0.93
TY1B-AO13527 ARO8YGL202W 1503 nt9.23□□□□□ -0.93
TY1B-AO13527 GRH1YDR517W 1119 nt9.23□□□□□ -0.93
TY1B-AO13527 YPT11YNL304W 1254 nt9.23□□□□□ -0.93
TY1B-AO13527 PAU21YOR394W 495 nt9.23□□□□□ -0.93
TY1B-AO13527 PAU22YPL282C 495 nt9.23□□□□□ -0.93
TY1B-AO13527 YMR265CYMR265C 1386 nt9.23□□□□□ -0.93
TY1B-AO13527 SUV3YPL029W 2214 nt9.23□□□□□ -0.93
TY1B-AO13527 YPL108WYPL108W 507 nt9.22□□□□□ -0.93
TY1B-AO13527 GID8YMR135C 1368 nt9.22□□□□□ -0.93
TY1B-AO13527 YAL016C-AYAL016C-A 315 nt9.21□□□□□ -0.94
TY1B-AO13527 VMA11YPL234C 495 nt9.21□□□□□ -0.94
TY1B-AO13527 GCD11YER025W 1584 nt9.2□□□□□ -0.94
TY1B-AO13527 RTG2YGL252C 1767 nt9.2□□□□□ -0.94
TY1B-AO13527 RPL12BYDR418W 498 nt9.2□□□□□ -0.94
TY1B-AO13527 PSD1YNL169C 1503 nt9.2□□□□□ -0.94
TY1B-AO13527 YFR020WYFR020W 699 nt9.19□□□□□ -0.94
TY1B-AO13527 RSM7YJR113C 744 nt9.19□□□□□ -0.94
TY1B-AO13527 EMC3YKL207W 762 nt9.19□□□□□ -0.94
TY1B-AO13527 CRC1YOR100C 984 nt9.19□□□□□ -0.94
TY1B-AO13527 KES1YPL145C 1305 nt9.19□□□□□ -0.94
TY1B-AO13527 SNU66YOR308C 1764 nt9.17□□□□□ -0.94
TY1B-AO13527 SNX3YOR357C 489 nt9.17□□□□□ -0.94
TY1B-AO13527 YKL133CYKL133C 1392 nt9.16□□□□□ -0.94
TY1B-AO13527 LSR1LSR1 1175 nt9.15□□□□□ -0.94
TY1B-AO13527 LSP1YPL004C 1026 nt9.15□□□□□ -0.94
TY1B-AO13527 COQ8YGL119W 1506 nt9.15□□□□□ -0.95
TY1B-AO13527 YMR210WYMR210W 1350 nt9.14□□□□□ -0.95
TY1B-AO13527 RPD3YNL330C 1302 nt9.14□□□□□ -0.95
TY1B-AO13527 YJL160CYJL160C 864 nt9.14□□□□□ -0.95
TY1B-AO13527 SAN1YDR143C 1833 nt9.14□□□□□ -0.95
TY1B-AO13527 YHR219WYHR219W 1875 nt9.13□□□□□ -0.95
TY1B-AO13527 LPD1YFL018C 1500 nt9.12□□□□□ -0.95
TY1B-AO13527 MRP1YDR347W 966 nt9.12□□□□□ -0.95
TY1B-AO13527 PTC6YCR079W 1329 nt9.11□□□□□ -0.95
TY1B-AO13527 GAS1YMR307W 1680 nt9.11□□□□□ -0.95
TY1B-AO13527 YLR460CYLR460C 1131 nt9.11□□□□□ -0.95
TY1B-AO13527 ECM10YEL030W 1935 nt9.11□□□□□ -0.95
TY1B-AO13527 KGD2YDR148C 1392 nt9.11□□□□□ -0.95
TY1B-AO13527 YMR166CYMR166C 1107 nt9.1□□□□□ -0.95
TY1B-AO13527 MRS6YOR370C 1812 nt9.1□□□□□ -0.95
TY1B-AO13527 SBP1YHL034C 885 nt9.09□□□□□ -0.95
TY1B-AO13527 SGA1YIL099W 1650 nt9.09□□□□□ -0.95
TY1B-AO13527 YOR268CYOR268C 399 nt9.08□□□□□ -0.96
TY1B-AO13527 ADE2YOR128C 1716 nt9.08□□□□□ -0.96
TY1B-AO13527 MFT1YML062C 1179 nt9.07□□□□□ -0.96
TY1B-AO13527 UGP1YKL035W 1500 nt9.06□□□□□ -0.96
TY1B-AO13527 YOR072WYOR072W 315 nt9.06□□□□□ -0.96
TY1B-AO13527 GDH1YOR375C 1365 nt9.05□□□□□ -0.96
TY1B-AO13527 KRR1YCL059C 951 nt9.05□□□□□ -0.96
TY1B-AO13527 RRT14YIL127C 621 nt9.05□□□□□ -0.96
TY1B-AO13527 HIS2YFR025C 1008 nt9.04□□□□□ -0.96
TY1B-AO13527 MEX67YPL169C 1800 nt9.03□□□□□ -0.96
TY1B-AO13527 SSL2YIL143C 2532 nt9.02□□□□□ -0.96
TY1B-AO13527 CHS7YHR142W 951 nt9.02□□□□□ -0.97
TY1B-AO13527 CAK1YFL029C 1107 nt9.01□□□□□ -0.97
TY1B-AO13527 OLA1YBR025C 1185 nt9.01□□□□□ -0.97
TY1B-AO13527 YPR084WYPR084W 1371 nt9□□□□□ -0.97
TY1B-AO13527 MAM3YOL060C 2121 nt9□□□□□ -0.97
TY1B-AO13527 PET18YCR020C 648 nt8.99□□□□□ -0.97
TY1B-AO13527 UFD1YGR048W 1086 nt8.99□□□□□ -0.97
TY1B-AO13527 CYT1YOR065W 930 nt8.98□□□□□ -0.97
TY1B-AO13527 ADA2YDR448W 1305 nt8.97□□□□□ -0.97
TY1B-AO13527 OCH1YGL038C 1443 nt8.97□□□□□ -0.97
TY1B-AO13527 tL(UAA)B1tL(UAA)B1 84 nt8.96□□□□□ -0.98
Retrieved 100 of 7,029 protein–RNA pairs in 6.8 ms