Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
CHL1O00533 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC33.84■■■■□ 3.01
CHL1O00533 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
CHL1O00533 PVT1-219ENST00000523427 938 ntTSL 3 BASIC33.83■■■■□ 3.01
CHL1O00533 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC33.82■■■■□ 3.01
CHL1O00533 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
CHL1O00533 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
CHL1O00533 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC33.81■■■■□ 3
CHL1O00533 LINC01971-201ENST00000617888 1048 ntBASIC33.8■■■■□ 3
CHL1O00533 LINC00273-201ENST00000539813 1452 ntBASIC33.8■■■■□ 3
CHL1O00533 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC33.79■■■■□ 3
CHL1O00533 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC33.77■■■■□ 3
CHL1O00533 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC33.76■■■■□ 3
CHL1O00533 DUX4L11-201ENST00000611504 1267 ntBASIC33.73■■■□□ 2.99
CHL1O00533 DUX4L12-201ENST00000614593 1267 ntBASIC33.73■■■□□ 2.99
CHL1O00533 DUX4L14-201ENST00000621227 1267 ntBASIC33.73■■■□□ 2.99
CHL1O00533 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC33.73■■■□□ 2.99
CHL1O00533 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC33.73■■■□□ 2.99
CHL1O00533 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC33.72■■■□□ 2.99
CHL1O00533 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
CHL1O00533 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC33.71■■■□□ 2.99
CHL1O00533 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
CHL1O00533 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC33.7■■■□□ 2.99
CHL1O00533 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
CHL1O00533 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC33.7■■■□□ 2.99
CHL1O00533 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
CHL1O00533 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC33.7■■■□□ 2.98
CHL1O00533 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
CHL1O00533 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC33.68■■■□□ 2.98
CHL1O00533 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC33.67■■■□□ 2.98
CHL1O00533 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC33.67■■■□□ 2.98
CHL1O00533 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
CHL1O00533 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
CHL1O00533 MACF1-219ENST00000484793 834 ntTSL 2 BASIC33.66■■■□□ 2.98
CHL1O00533 RNF166-209ENST00000567844 633 ntTSL 5 BASIC33.66■■■□□ 2.98
CHL1O00533 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
CHL1O00533 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC33.65■■■□□ 2.98
CHL1O00533 AC135983.2-203ENST00000454486 1613 ntBASIC33.64■■■□□ 2.98
CHL1O00533 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
CHL1O00533 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC33.64■■■□□ 2.98
CHL1O00533 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC33.64■■■□□ 2.98
CHL1O00533 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
CHL1O00533 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
CHL1O00533 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC33.63■■■□□ 2.97
CHL1O00533 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC33.63■■■□□ 2.97
CHL1O00533 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC33.62■■■□□ 2.97
CHL1O00533 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC33.62■■■□□ 2.97
CHL1O00533 ABCB10P1-201ENST00000614297 2181 ntBASIC33.62■■■□□ 2.97
CHL1O00533 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC33.61■■■□□ 2.97
CHL1O00533 MIR3648-2-201ENST00000581792 180 ntBASIC33.61■■■□□ 2.97
CHL1O00533 MIR3648-1-201ENST00000615959 180 ntBASIC33.61■■■□□ 2.97
CHL1O00533 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
CHL1O00533 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC33.6■■■□□ 2.97
CHL1O00533 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC33.59■■■□□ 2.97
CHL1O00533 CR559946.2-201ENST00000623684 991 ntBASIC33.59■■■□□ 2.97
CHL1O00533 WHAMMP2-203ENST00000563942 1603 ntBASIC33.59■■■□□ 2.97
CHL1O00533 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
CHL1O00533 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC33.58■■■□□ 2.97
CHL1O00533 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC33.58■■■□□ 2.97
CHL1O00533 DUX4L13-201ENST00000554103 1267 ntBASIC33.58■■■□□ 2.97
CHL1O00533 DUX4L15-201ENST00000611059 1267 ntBASIC33.58■■■□□ 2.97
CHL1O00533 DUX4L23-201ENST00000615195 1269 ntBASIC33.58■■■□□ 2.97
CHL1O00533 DUX4L24-201ENST00000617576 1269 ntBASIC33.58■■■□□ 2.97
CHL1O00533 DUX4L22-201ENST00000618238 1269 ntBASIC33.58■■■□□ 2.97
CHL1O00533 DUX4L20-201ENST00000619712 1269 ntBASIC33.58■■■□□ 2.97
CHL1O00533 DUX4L21-201ENST00000622058 1269 ntBASIC33.58■■■□□ 2.97
CHL1O00533 DUX4L10-201ENST00000622460 1267 ntBASIC33.58■■■□□ 2.97
CHL1O00533 DUX4L25-201ENST00000624915 1269 ntBASIC33.58■■■□□ 2.97
CHL1O00533 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
CHL1O00533 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC33.58■■■□□ 2.97
CHL1O00533 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC33.58■■■□□ 2.97
CHL1O00533 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC33.57■■■□□ 2.96
CHL1O00533 GDI1-215ENST00000630693 786 ntTSL 4 BASIC33.57■■■□□ 2.96
CHL1O00533 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
CHL1O00533 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
CHL1O00533 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC33.56■■■□□ 2.96
CHL1O00533 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC33.56■■■□□ 2.96
CHL1O00533 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC33.56■■■□□ 2.96
CHL1O00533 MBP-237ENST00000579129 1052 ntTSL 5 BASIC33.56■■■□□ 2.96
CHL1O00533 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC33.56■■■□□ 2.96
CHL1O00533 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC33.56■■■□□ 2.96
CHL1O00533 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
CHL1O00533 AGPS-202ENST00000409888 815 ntTSL 4 BASIC33.55■■■□□ 2.96
CHL1O00533 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC33.55■■■□□ 2.96
CHL1O00533 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
CHL1O00533 RPS2-202ENST00000526522 924 ntTSL 2 BASIC33.54■■■□□ 2.96
CHL1O00533 CHML-204ENST00000638121 920 ntTSL 2 BASIC33.54■■■□□ 2.96
CHL1O00533 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
CHL1O00533 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC33.52■■■□□ 2.96
CHL1O00533 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
CHL1O00533 AC016575.1-201ENST00000607026 382 ntBASIC33.52■■■□□ 2.96
CHL1O00533 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
CHL1O00533 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC33.51■■■□□ 2.95
CHL1O00533 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
CHL1O00533 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
CHL1O00533 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC33.5■■■□□ 2.95
CHL1O00533 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
CHL1O00533 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC33.5■■■□□ 2.95
CHL1O00533 HLA-V-202ENST00000446817 847 ntBASIC33.5■■■□□ 2.95
CHL1O00533 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC33.5■■■□□ 2.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms