Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AP004289.1-201ENST00000436307 2205 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 PMS2P9-201ENST00000441237 515 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 NR1H5P-201ENST00000452683 1377 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 CUBNP3-201ENST00000457461 1784 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 AC096743.1-201ENST00000485172 319 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 HNRNPA1P17-201ENST00000496620 924 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 AC096754.1-201ENST00000508904 818 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 RN7SKP64-201ENST00000517206 328 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 NATP-201ENST00000523491 878 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 GLYATL1P4-201ENST00000529326 906 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 OR4A21P-201ENST00000532759 944 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 FRG2IP-201ENST00000563581 781 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 AC113361.1-201ENST00000606683 543 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 AP002345.2-201ENST00000609961 904 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 AC027271.1-201ENST00000610270 610 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 AL137058.3-201ENST00000624531 3099 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 AC005034.3-201ENST00000604845 1747 ntBASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 CYP2G2P-201ENST00000594920 1485 ntBASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 RBMY1A3P-201ENST00000382670 1404 ntBASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 RPL10P16-201ENST00000325000 645 ntBASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 RNU6-1017P-201ENST00000363613 106 ntBASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 RPL12P1-201ENST00000374520 498 ntBASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 RN7SKP85-201ENST00000411349 318 ntBASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 SNX18P13-201ENST00000412442 529 ntBASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 PHBP4-201ENST00000437447 837 ntBASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 ST13P2-201ENST00000438916 1109 ntBASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 AC068522.1-201ENST00000482895 345 ntBASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 RN7SL775P-201ENST00000498361 336 ntBASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 SNORA70D-201ENST00000578836 135 ntBASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 AL034374.2-201ENST00000605281 548 ntBASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 AC127071.1-201ENST00000624997 712 ntBASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDD3Q9Y3P4 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 UGT2B27P-201ENST00000505092 1620 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 AC007406.5-201ENST00000570140 3170 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms