Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ASB8-218ENST00000629941 278 ntTSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AL356585.10-201ENST00000641883 123 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 RNU6-1017P-201ENST00000363613 106 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 RN7SKP55-201ENST00000364888 307 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 SNORA70.5-201ENST00000365519 135 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 RNU1-56P-201ENST00000391303 164 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AL139100.1-201ENST00000408001 498 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 SSR1P2-201ENST00000415208 787 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 BMS1P13-201ENST00000417301 885 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AL445193.2-201ENST00000419596 620 ntTSL 3 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 ZNF885P-201ENST00000420174 1098 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AL390879.2-203ENST00000426943 1121 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 BMS1P11-201ENST00000442351 885 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 BMS1P9-201ENST00000457640 885 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AC117395.2-201ENST00000463122 1128 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 MTND2P38-201ENST00000522536 667 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 OR5M6P-201ENST00000530227 937 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 SAA3P-201ENST00000533267 365 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 DCN-215ENST00000550099 719 ntTSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AC013283.1-201ENST00000557282 492 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AC091932.1-201ENST00000569381 427 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 MIR3135A-201ENST00000578460 77 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AL139317.4-201ENST00000605879 760 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AC242628.1-201ENST00000606810 391 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 MIR8082-201ENST00000612488 81 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AC087894.3-201ENST00000623682 349 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AC130456.6-201ENST00000623745 765 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AC117503.3-201ENST00000623811 601 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AP003108.4-201ENST00000623917 878 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AC120349.3-201ENST00000624377 529 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AL049541.2-201ENST00000626377 555 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AC026108.1-201ENST00000635444 547 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 RFC1-217ENST00000639695 867 ntTSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 AL034417.4-202ENST00000642135 2236 ntBASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP1Q96SZ6 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
CDK5RAP1Q96SZ6 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CDK5RAP1Q96SZ6 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
CDK5RAP1Q96SZ6 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
CDK5RAP1Q96SZ6 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.46□□□□□ -1.21
CDK5RAP1Q96SZ6 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.46□□□□□ -1.21
CDK5RAP1Q96SZ6 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
CDK5RAP1Q96SZ6 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.46□□□□□ -1.21
CDK5RAP1Q96SZ6 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
CDK5RAP1Q96SZ6 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms