Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 PHBP2-201ENST00000532859 806 ntBASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 MIR4312-201ENST00000579909 76 ntBASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AC087575.1-201ENST00000585087 229 ntBASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AC020914.7-201ENST00000594477 545 ntBASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AL035410.2-201ENST00000604963 864 ntBASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 MIR6070-201ENST00000613967 103 ntBASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 DLEU2L-201ENST00000371086 3555 ntBASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AC073342.2-201ENST00000595842 1800 ntBASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 RAD17P2-201ENST00000451754 1977 ntBASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 RPL12P13-201ENST00000310055 497 ntBASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 UOX-201ENST00000471089 899 ntBASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 AC253576.1-201ENST00000511645 1156 ntBASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 RNA5SP278-201ENST00000517055 102 ntBASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 AP002004.1-206ENST00000532441 876 ntBASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 RN7SL32P-201ENST00000580514 281 ntBASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 MRPL57P3-201ENST00000619218 176 ntBASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
C9orf40Q8IXQ3 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 ENO1P4-201ENST00000416471 1785 ntBASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 AC095038.1-201ENST00000429248 1591 ntBASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 RN7SKP189-201ENST00000365042 330 ntBASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 RNA5SP152-201ENST00000365184 110 ntBASIC6.37□□□□□ -1.39
C9orf40Q8IXQ3 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms