Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 RGS5-202ENST00000367903 934 ntTSL 3 BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 RPL12P23-201ENST00000405880 490 ntBASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 PSMD8P1-201ENST00000436275 769 ntBASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 ZNF736P11Y-201ENST00000442535 1213 ntBASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 ZNF736P12Y-201ENST00000443152 1243 ntBASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 ZNF736P4Y-201ENST00000454995 1243 ntBASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 PGBD4P1-201ENST00000473644 407 ntBASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 RN7SL70P-201ENST00000478322 302 ntBASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 AC009567.2-201ENST00000502989 349 ntBASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 OR9L1P-201ENST00000529493 933 ntBASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 AC022079.1-201ENST00000621546 602 ntBASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 AC025287.2-201ENST00000621911 668 ntBASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 MBD5-221ENST00000637159 902 ntTSL 5 BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 AC020978.8-201ENST00000571975 3022 ntBASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 SMN2-214ENST00000626847 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
BHLHA9Q7RTU4 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 ASNSP6-201ENST00000592770 1618 ntBASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 RNU1-5P-201ENST00000362684 144 ntBASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 RNA5SP474-201ENST00000391234 90 ntBASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 UBBP1-201ENST00000392399 473 ntBASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AC026310.1-201ENST00000396004 378 ntBASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 FDPSP5-201ENST00000399474 1057 ntBASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 CDC42P6-201ENST00000421246 576 ntBASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 CRYGGP-201ENST00000443337 145 ntBASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 PPIAP32-201ENST00000449940 472 ntBASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 RPL31P11-202ENST00000454082 372 ntBASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 RN7SL216P-201ENST00000471607 298 ntBASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 HMGN1P26-201ENST00000558737 303 ntBASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 OR4C49P-201ENST00000563891 900 ntBASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AC068408.1-201ENST00000577406 1144 ntBASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AL138693.1-201ENST00000622219 129 ntBASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AC120057.5-201ENST00000623840 154 ntBASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AC020658.2-201ENST00000559030 4020 ntBASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.09□□□□□ -1.27
BHLHA9Q7RTU4 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms