Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SUMO3P55854 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
SUMO3P55854 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SUMO3P55854 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC6.63□□□□□ -1.35
SUMO3P55854 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
SUMO3P55854 AC006116.1-201ENST00000587908 2171 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.62□□□□□ -1.35
SUMO3P55854 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.62□□□□□ -1.35
SUMO3P55854 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6.62□□□□□ -1.35
SUMO3P55854 AC110792.3-201ENST00000595906 1614 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 MRPS17P1-201ENST00000596009 3130 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.62□□□□□ -1.35
SUMO3P55854 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
SUMO3P55854 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
SUMO3P55854 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 RPL5P5-201ENST00000392009 893 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 AC226101.1-201ENST00000401483 387 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 ST13P16-201ENST00000401760 781 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 PPIL1P1-201ENST00000423936 499 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 CLCN3P1-201ENST00000423965 1017 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 RPL5P34-201ENST00000426545 891 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 AC105052.2-201ENST00000434317 794 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 AC079781.1-201ENST00000441505 394 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC6.62□□□□□ -1.35
SUMO3P55854 RPL5P9-201ENST00000448118 886 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 RAB28P3-201ENST00000448325 597 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.62□□□□□ -1.35
SUMO3P55854 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC6.62□□□□□ -1.35
SUMO3P55854 AC008967.1-201ENST00000504843 163 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.62□□□□□ -1.35
SUMO3P55854 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC6.62□□□□□ -1.35
SUMO3P55854 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.62□□□□□ -1.35
SUMO3P55854 AC120036.3-201ENST00000517826 292 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 ST13P6-201ENST00000522430 1102 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.62□□□□□ -1.35
SUMO3P55854 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
SUMO3P55854 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.62□□□□□ -1.35
SUMO3P55854 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.62□□□□□ -1.35
SUMO3P55854 AC092368.2-201ENST00000565911 600 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 EEF1B2P1-201ENST00000567221 672 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 AP001496.3-201ENST00000580230 913 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 AP001554.1-201ENST00000604533 376 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 AL355333.1-201ENST00000605632 279 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 AL450270.1-201ENST00000606160 391 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 AP005329.3-201ENST00000609924 686 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.62□□□□□ -1.35
SUMO3P55854 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
SUMO3P55854 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
SUMO3P55854 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC6.62□□□□□ -1.35
SUMO3P55854 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.62□□□□□ -1.35
SUMO3P55854 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC6.62□□□□□ -1.35
SUMO3P55854 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.62□□□□□ -1.35
SUMO3P55854 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
SUMO3P55854 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC6.62□□□□□ -1.35
SUMO3P55854 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
SUMO3P55854 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
SUMO3P55854 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SUMO3P55854 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SUMO3P55854 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
SUMO3P55854 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC6.61□□□□□ -1.35
SUMO3P55854 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.61□□□□□ -1.35
SUMO3P55854 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SUMO3P55854 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.61□□□□□ -1.35
SUMO3P55854 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
SUMO3P55854 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SUMO3P55854 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SUMO3P55854 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SUMO3P55854 AC123769.2-201ENST00000624332 5984 ntBASIC6.61□□□□□ -1.35
SUMO3P55854 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SUMO3P55854 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SUMO3P55854 AC012213.2-201ENST00000562917 4597 ntBASIC6.61□□□□□ -1.35
SUMO3P55854 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SUMO3P55854 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SUMO3P55854 SNORA70.8-201ENST00000384231 136 ntBASIC6.61□□□□□ -1.35
SUMO3P55854 RNU6-40P-201ENST00000384254 107 ntBASIC6.61□□□□□ -1.35
SUMO3P55854 RN7SKP39-201ENST00000410773 322 ntBASIC6.61□□□□□ -1.35
SUMO3P55854 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.61□□□□□ -1.35
SUMO3P55854 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC6.61□□□□□ -1.35
SUMO3P55854 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.61□□□□□ -1.35
SUMO3P55854 MTND4P24-201ENST00000424002 397 ntBASIC6.61□□□□□ -1.35
SUMO3P55854 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.61□□□□□ -1.35
SUMO3P55854 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms